Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 AC007322.1-201ENST00000426983 750 ntBASIC15.9■□□□□ 0.14
CGB1A6NKQ9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 AC092437.1-201ENST00000624794 1048 ntBASIC15.9■□□□□ 0.14
CGB1A6NKQ9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CGB1A6NKQ9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 AC004911.1-201ENST00000416316 871 ntBASIC15.89■□□□□ 0.13
CGB1A6NKQ9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 AC069236.1-201ENST00000604339 616 ntBASIC15.89■□□□□ 0.13
CGB1A6NKQ9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.89■□□□□ 0.13
CGB1A6NKQ9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.88■□□□□ 0.13
CGB1A6NKQ9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 KRT8P17-201ENST00000453110 1448 ntBASIC15.88■□□□□ 0.13
CGB1A6NKQ9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 AC093787.1-201ENST00000450396 207 ntBASIC15.88■□□□□ 0.13
CGB1A6NKQ9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CGB1A6NKQ9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 AC010980.2-201ENST00000587099 1412 ntBASIC15.87■□□□□ 0.13
CGB1A6NKQ9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 OR10C1-204ENST00000622521 1039 ntBASIC15.87■□□□□ 0.13
CGB1A6NKQ9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 KRT17P1-201ENST00000399211 1546 ntBASIC15.87■□□□□ 0.13
CGB1A6NKQ9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CGB1A6NKQ9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.86■□□□□ 0.13
CGB1A6NKQ9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms