Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 AC018553.1-201ENST00000616682 1458 ntBASIC17.55■□□□□ 0.4
MBD3L3A6NE82 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.55■□□□□ 0.4
MBD3L3A6NE82 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
MBD3L3A6NE82 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 NUDT16P1-203ENST00000513809 620 ntBASIC17.54■□□□□ 0.4
MBD3L3A6NE82 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MBD3L3A6NE82 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 AC087499.1-201ENST00000418141 1075 ntBASIC17.53■□□□□ 0.4
MBD3L3A6NE82 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 C1QL1P1-201ENST00000568105 661 ntBASIC17.53■□□□□ 0.4
MBD3L3A6NE82 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.53■□□□□ 0.4
MBD3L3A6NE82 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MBD3L3A6NE82 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 SMG8-203ENST00000578922 2178 ntBASIC17.52■□□□□ 0.39
MBD3L3A6NE82 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MBD3L3A6NE82 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 KRT16P1-201ENST00000399124 1418 ntBASIC17.51■□□□□ 0.39
MBD3L3A6NE82 KRT18P16-201ENST00000510337 1294 ntBASIC17.51■□□□□ 0.39
MBD3L3A6NE82 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MBD3L3A6NE82 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms