Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
TBC1D3BA6NDS4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TBC1D3BA6NDS4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TBC1D3BA6NDS4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TBC1D3BA6NDS4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 AL353708.3-201ENST00000610272 989 ntBASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.25■□□□□ 0.83
TBC1D3BA6NDS4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 MMP23A-201ENST00000234610 1017 ntBASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.24■□□□□ 0.83
TBC1D3BA6NDS4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 MIR1224-201ENST00000408193 85 ntBASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 KRT16P6-202ENST00000425692 1426 ntBASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 CR392000.1-201ENST00000624770 1228 ntBASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 AIRN-201ENST00000601203 4374 ntBASIC20.23■□□□□ 0.83
TBC1D3BA6NDS4 AC092720.2-201ENST00000602388 1665 ntBASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 AP006587.1-201ENST00000534129 1502 ntBASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 NUDT16P1-203ENST00000513809 620 ntBASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 AC097493.4-201ENST00000641197 219 ntBASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
TBC1D3BA6NDS4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.21■□□□□ 0.83
TBC1D3BA6NDS4 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms