Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.95■□□□□ 0.62
LRIT2A6NDA9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRIT2A6NDA9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.95■□□□□ 0.62
LRIT2A6NDA9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRIT2A6NDA9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.94■□□□□ 0.62
LRIT2A6NDA9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.94■□□□□ 0.62
LRIT2A6NDA9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRIT2A6NDA9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 RNA5SP413-201ENST00000516373 109 ntBASIC18.93■□□□□ 0.62
LRIT2A6NDA9 UNC93B5-201ENST00000530315 699 ntBASIC18.93■□□□□ 0.62
LRIT2A6NDA9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRIT2A6NDA9 PHGDH-210ENST00000641115 1638 ntBASIC18.92■□□□□ 0.62
LRIT2A6NDA9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRIT2A6NDA9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 UNC93B4-201ENST00000505679 747 ntBASIC18.91■□□□□ 0.62
LRIT2A6NDA9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 SOX15-203ENST00000570788 1093 ntBASIC18.91■□□□□ 0.62
LRIT2A6NDA9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 AC120498.8-201ENST00000614275 531 ntBASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TMEM179-206ENST00000616017 1645 ntBASIC18.91■□□□□ 0.62
LRIT2A6NDA9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRIT2A6NDA9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.9■□□□□ 0.62
LRIT2A6NDA9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.9■□□□□ 0.62
LRIT2A6NDA9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms