Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC189A1A4V9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 AL356652.1-201ENST00000615962 565 ntBASIC19.85■□□□□ 0.77
CCDC189A1A4V9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC189A1A4V9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 AC120498.9-201ENST00000339021 3867 ntBASIC19.84■□□□□ 0.77
CCDC189A1A4V9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC189A1A4V9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 AC007613.1-201ENST00000572811 2597 ntBASIC19.83■□□□□ 0.77
CCDC189A1A4V9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.83■□□□□ 0.77
CCDC189A1A4V9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC189A1A4V9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC189A1A4V9 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC189A1A4V9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC189A1A4V9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC189A1A4V9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 CYP21A1P-202ENST00000354927 1481 ntBASIC19.82■□□□□ 0.76
CCDC189A1A4V9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC189A1A4V9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 AP000974.1-201ENST00000623909 2387 ntBASIC19.81■□□□□ 0.76
CCDC189A1A4V9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC189A1A4V9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms