Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TCRBV3S1A0A5B6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 AL356441.2-201ENST00000443009 864 ntBASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 AC079140.4-201ENST00000507448 529 ntBASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 AL355001.2-201ENST00000620617 1191 ntBASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 AL358852.1-201ENST00000623174 1268 ntBASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TCRBV3S1A0A5B6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AC009113.1-201ENST00000570267 2443 ntBASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AC027682.1-201ENST00000562846 899 ntBASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AL136162.1-201ENST00000607711 1078 ntBASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AC243732.1-201ENST00000612648 864 ntBASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TCRBV3S1A0A5B6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TCRBV3S1A0A5B6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 AC104581.1-202ENST00000635932 2618 ntBASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 AC135279.3-201ENST00000610945 1311 ntBASIC18.59■□□□□ 0.57
TCRBV3S1A0A5B6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms