Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 AC105020.6-201ENST00000621523 1217 ntBASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 AC092437.1-201ENST00000624794 1048 ntBASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRGV4A0A0C4DH28 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 LSM12P1-201ENST00000411836 588 ntBASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 AL355472.2-201ENST00000422958 438 ntBASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 AC006970.2-201ENST00000450065 779 ntBASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 AC010980.2-201ENST00000587099 1412 ntBASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.28□□□□□ -0.12
TRGV4A0A0C4DH28 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRGV4A0A0C4DH28 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 MIR663A-201ENST00000385250 93 ntBASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 AL512625.2-201ENST00000417533 625 ntBASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 AF201337.1-201ENST00000520239 748 ntBASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 AC105036.2-201ENST00000569468 176 ntBASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 AL162377.1-201ENST00000618844 1793 ntBASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRGV4A0A0C4DH28 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRGV4A0A0C4DH28 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms