Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC187A0A096LP49 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 FSCN1P1-201ENST00000568912 1481 ntBASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 C1QL1P1-201ENST00000568105 661 ntBASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 AC026271.3-201ENST00000571884 352 ntBASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 AP006587.1-201ENST00000534129 1502 ntBASIC18.9■□□□□ 0.62
CCDC187A0A096LP49 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC187A0A096LP49 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.89■□□□□ 0.62
CCDC187A0A096LP49 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 C2orf69P3-201ENST00000565542 1120 ntBASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 AC073508.3-201ENST00000619697 1419 ntBASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC187A0A096LP49 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 LINC00565-201ENST00000562710 2331 ntBASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC187A0A096LP49 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 DGCR10-201ENST00000609839 495 ntBASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 AL445675.2-201ENST00000620291 557 ntBASIC18.87■□□□□ 0.61
CCDC187A0A096LP49 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 AL024507.2-201ENST00000606070 2574 ntBASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC187A0A096LP49 LIN28AP1-201ENST00000429574 405 ntBASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms