Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 MIR301B-201ENST00000390813 78 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 TECRP2-201ENST00000503270 928 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC011352.2-201ENST00000514574 1016 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AP001646.2-201ENST00000528645 1156 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 NXPE2P1-201ENST00000543705 726 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC092375.1-201ENST00000550410 637 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC018558.4-201ENST00000622153 281 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC026108.1-201ENST00000635444 547 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 CCAT2-201ENST00000630920 1752 ntBASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.95□□□□□ -1.46
RHBDD3Q9Y3P4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 RNA5SP114-201ENST00000363780 113 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 RNA5SP53-201ENST00000391299 120 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC018804.1-201ENST00000430381 618 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 BX005266.3-201ENST00000443013 1075 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 CT45A11P-201ENST00000448043 1134 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 RN7SL561P-201ENST00000488553 281 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC007537.1-201ENST00000539347 327 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 FXYD6P1-201ENST00000604857 285 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 SNX18P10-201ENST00000625014 519 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC009120.2-204ENST00000621548 2032 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 GOT2P1-201ENST00000440922 1309 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 AC022507.1-201ENST00000548349 1505 ntBASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.94□□□□□ -1.46
RHBDD3Q9Y3P4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RHBDD3Q9Y3P4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms