Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RNU6-157P-201ENST00000383957 107 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MT-TR-201ENST00000387439 65 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPL17P50-201ENST00000396131 546 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPL5P35-201ENST00000398869 816 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RNU6-920P-201ENST00000410926 92 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 LINC02028-201ENST00000420947 528 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AL031733.1-201ENST00000422817 455 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC005534.2-201ENST00000431047 433 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC000362.1-201ENST00000433725 425 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 EIF5AP4-201ENST00000441206 465 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AL590609.1-201ENST00000442164 328 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 USP9YP15-201ENST00000442391 422 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 HMGB3P6-201ENST00000444896 598 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 BX322784.1-201ENST00000455793 1077 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPLP0P1-201ENST00000457002 361 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RBM43P1-201ENST00000476891 1081 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPL23AP80-201ENST00000495605 424 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RN7SL182P-201ENST00000496499 300 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC114300.1-201ENST00000502347 280 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AP003080.1-202ENST00000526526 915 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 NF1P12-201ENST00000549593 583 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC007151.1-201ENST00000572774 483 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC011260.1-201ENST00000578420 472 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 OR7E19P-202ENST00000589942 844 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 DUXAP4-201ENST00000603046 613 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AP001554.1-201ENST00000604533 376 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 MIR7162-201ENST00000611134 69 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC040978.1-201ENST00000617244 1282 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC008121.3-201ENST00000618726 433 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 RACK1-235ENST00000626067 564 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ELP3-202ENST00000380353 3078 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 OFD1P15Y-201ENST00000411536 1392 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 AC074281.1-201ENST00000436419 2081 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 PABPC1P12-201ENST00000428454 2175 ntBASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CNTNAP3Q9BZ76 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC128688.2-201ENST00000563632 1937 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 AP000542.3-201ENST00000623391 6114 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 GALNT15-206ENST00000617544 2775 ntTSL 5 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TMSB4XP4-201ENST00000323496 618 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 RNU4-21P-201ENST00000362802 126 ntBASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CNTNAP3Q9BZ76 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms