Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC024937.2-201ENST00000411669 1242 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC019070.1-201ENST00000415008 1024 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AL161742.1-201ENST00000418154 584 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 PUDPP2-201ENST00000431423 643 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC013410.1-201ENST00000436223 1232 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AL354714.5-201ENST00000450131 590 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 OR7E7P-201ENST00000455678 1012 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RN7SL149P-201ENST00000465197 281 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RPS16P9-201ENST00000477220 427 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RPL23AP68-201ENST00000480924 445 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC021220.1-201ENST00000507445 630 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AP006587.5-201ENST00000532033 739 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 SNORA70D-201ENST00000578836 135 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC090241.1-201ENST00000587732 621 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC023206.1-201ENST00000605824 298 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC009283.1-201ENST00000615852 645 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AL109620.1-201ENST00000618738 1197 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 AC140479.4-205ENST00000636339 820 ntBASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDK5RAP3Q96JB5 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 NCOA4P3-201ENST00000513203 1877 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 OR10D1P-201ENST00000355343 936 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 RNA5SP65-201ENST00000363166 119 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AL117344.1-201ENST00000407196 616 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 MICG-208ENST00000416822 132 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AL138479.1-201ENST00000426913 484 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 BX119904.3-201ENST00000428194 957 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC091390.2-201ENST00000432573 374 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 RSL24D1P8-201ENST00000434442 492 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 PHB2P1-201ENST00000434943 890 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AL096803.1-201ENST00000456921 1021 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 RPL5P11-201ENST00000498068 893 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC134698.1-201ENST00000511619 643 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC103855.4-201ENST00000533158 265 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC067805.1-201ENST00000559344 470 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC020914.7-201ENST00000594477 545 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC007620.3-201ENST00000608131 497 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 AC005753.1-201ENST00000623837 618 ntBASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP3Q96JB5 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CDK5RAP3Q96JB5 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms