Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 FDPSP5-201ENST00000399474 1057 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 RN7SKP205-201ENST00000410999 307 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AL773545.3-201ENST00000414297 706 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AL596268.1-201ENST00000427910 1048 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 HSPE1P27-201ENST00000430808 296 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 RPEP4-201ENST00000437636 602 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 GAPDHP20-201ENST00000444107 1007 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC005165.2-201ENST00000466070 380 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 RPS10P20-201ENST00000494130 463 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC092349.1-201ENST00000504903 310 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SNX18P23-201ENST00000510867 677 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC015819.1-201ENST00000613588 663 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 AC020978.6-201ENST00000571197 3177 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 WBP11P1-201ENST00000562560 1931 ntBASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.33□□□□□ -1.4
H3F3CQ6NXT2 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AC093829.1-201ENST00000506662 1618 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 MAPK10-383ENST00000642032 3390 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 UBBP1-201ENST00000392399 473 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 CYP4F32P-201ENST00000426492 504 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 BX119917.1-201ENST00000432517 502 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 RPL12P49-201ENST00000441100 121 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 CEACAMP5-201ENST00000448037 961 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AL390728.3-201ENST00000452704 270 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 MEF2AP1-201ENST00000454867 863 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AC135721.2-201ENST00000464237 300 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 RPS4XP23-201ENST00000487801 237 ntBASIC6.32□□□□□ -1.4
H3F3CQ6NXT2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms