Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CDH12P3-201ENST00000517935 295 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 CDH12P1-201ENST00000518435 295 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AL035410.2-201ENST00000604963 864 ntBASIC6.55□□□□□ -1.36
RIF1Q5UIP0 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RIF1Q5UIP0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 MAPK10-285ENST00000641207 2746 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 CR383656.5-201ENST00000547616 1340 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 SPTLC1P2-201ENST00000407089 121 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 RPL23AP27-201ENST00000415161 451 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 RPL5P6-201ENST00000425640 886 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 PSMA6P2-201ENST00000457574 686 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AC026336.1-201ENST00000466577 351 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 PGAM4P2-201ENST00000512491 721 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 RPS11-202ENST00000594493 575 ntTSL 3 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AF117829.2-201ENST00000619538 361 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AKAP17BP-201ENST00000431706 2719 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 TNFSF15-201ENST00000374044 2789 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 UBFD1P1-201ENST00000473259 814 ntBASIC6.54□□□□□ -1.36
RIF1Q5UIP0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RIF1Q5UIP0 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AL121949.2-201ENST00000403446 1548 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 TPTE2P2-201ENST00000403471 1466 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 RN7SKP271-201ENST00000410528 320 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AL929472.1-201ENST00000417484 429 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AP000864.1-201ENST00000609424 650 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 MIR7155-201ENST00000615925 56 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ATMIN-206ENST00000566488 5343 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AC027575.3-201ENST00000583058 2747 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 GM2AP2-201ENST00000491764 562 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AC007346.1-201ENST00000569208 867 ntBASIC6.53□□□□□ -1.36
RIF1Q5UIP0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
RIF1Q5UIP0 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms