Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC9.36□□□□□ -0.91
CPS1P31327 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 RNF19BPY-201ENST00000458209 1550 ntBASIC9.36□□□□□ -0.91
CPS1P31327 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9.36□□□□□ -0.91
CPS1P31327 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC9.36□□□□□ -0.91
CPS1P31327 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 AC017035.1-201ENST00000411999 1115 ntBASIC9.36□□□□□ -0.91
CPS1P31327 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 NPM1P22-201ENST00000427761 952 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC9.36□□□□□ -0.91
CPS1P31327 EMC3-AS1-205ENST00000438698 534 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AL355355.1-201ENST00000442900 793 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AC063943.2-201ENST00000495697 534 ntBASIC9.36□□□□□ -0.91
CPS1P31327 PABPC1P1-201ENST00000506347 591 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 MRPS21P8-201ENST00000569196 235 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AP003115.1-201ENST00000569849 463 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AF117829.2-201ENST00000619538 361 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AC130456.6-201ENST00000623745 765 ntBASIC9.36□□□□□ -0.91
CPS1P31327 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 AC104837.1-201ENST00000444644 1587 ntBASIC9.35□□□□□ -0.91
CPS1P31327 AC132219.2-201ENST00000624416 2327 ntBASIC9.35□□□□□ -0.91
CPS1P31327 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CPS1P31327 HCG18-244ENST00000602516 2890 ntBASIC9.35□□□□□ -0.91
CPS1P31327 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
CPS1P31327 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
CPS1P31327 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 IL24-207ENST00000611909 1621 ntTSL 3 BASIC9.35□□□□□ -0.91
CPS1P31327 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 OR52B3P-201ENST00000314715 928 ntBASIC9.35□□□□□ -0.91
CPS1P31327 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CPS1P31327 PRELID1P2-201ENST00000407805 396 ntBASIC9.35□□□□□ -0.91
CPS1P31327 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC9.35□□□□□ -0.91
CPS1P31327 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 AC094019.1-201ENST00000434678 472 ntBASIC9.35□□□□□ -0.91
CPS1P31327 RPL12P30-201ENST00000488389 499 ntBASIC9.35□□□□□ -0.91
CPS1P31327 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC9.35□□□□□ -0.91
CPS1P31327 MRO-208ENST00000588444 866 ntTSL 3 BASIC9.35□□□□□ -0.91
CPS1P31327 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 Six3os1_4.1-201ENST00000615706 324 ntBASIC9.35□□□□□ -0.91
CPS1P31327 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC9.35□□□□□ -0.91
CPS1P31327 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC9.35□□□□□ -0.91
CPS1P31327 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CPS1P31327 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC9.34□□□□□ -0.91
CPS1P31327 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CPS1P31327 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
CPS1P31327 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 AC022613.3-201ENST00000560740 1346 ntBASIC9.34□□□□□ -0.91
CPS1P31327 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 MAPK10-261ENST00000641050 3109 ntBASIC9.34□□□□□ -0.91
CPS1P31327 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 CEP41-219ENST00000616628 3315 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC9.34□□□□□ -0.91
CPS1P31327 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC9.34□□□□□ -0.91
CPS1P31327 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC9.34□□□□□ -0.91
CPS1P31327 AP000281.1-201ENST00000444036 316 ntBASIC9.34□□□□□ -0.91
CPS1P31327 AL163193.1-201ENST00000444895 788 ntBASIC9.34□□□□□ -0.91
CPS1P31327 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC9.34□□□□□ -0.91
CPS1P31327 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC9.34□□□□□ -0.91
CPS1P31327 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC9.34□□□□□ -0.91
CPS1P31327 AC008055.1-201ENST00000547032 609 ntBASIC9.34□□□□□ -0.91
CPS1P31327 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC9.34□□□□□ -0.91
CPS1P31327 CCT5-215ENST00000625723 135 ntTSL 5 BASIC9.34□□□□□ -0.91
CPS1P31327 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CPS1P31327 USP13-203ENST00000496897 2747 ntTSL 2 BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms