Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 RPL12P13-201ENST00000310055 497 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 SNORA51.9-201ENST00000384295 124 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 MTND6P1-201ENST00000417434 424 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 IPPKP1-201ENST00000422501 768 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 CRYGGP-201ENST00000443337 145 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 VPS25P1-201ENST00000455691 508 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 RPL5P14-201ENST00000494197 878 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC008429.2-201ENST00000523057 864 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC008055.1-201ENST00000547032 609 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 FO681491.1-202ENST00000623392 737 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 SAMMSON-214ENST00000641395 1264 ntBASIC8.08□□□□□ -1.12
SNED1Q8TER0 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC083806.2-201ENST00000617795 2685 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 AL031595.3-201ENST00000624919 14262 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 RN7SKP69-201ENST00000365390 305 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 HMGN1P20-201ENST00000411849 300 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC094019.1-201ENST00000434678 472 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 CEACAMP5-201ENST00000448037 961 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 RBBP4P1-201ENST00000502424 1276 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC025458.1-201ENST00000506046 166 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 RNA5SP206-201ENST00000516703 121 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC060775.1-201ENST00000518241 520 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC103703.1-201ENST00000634783 663 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 MIR4302-201ENST00000638058 60 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.07□□□□□ -1.12
SNED1Q8TER0 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
SNED1Q8TER0 KARSP1-201ENST00000451871 1752 ntBASIC8.07□□□□□ -1.12
SNED1Q8TER0 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AL359396.1-201ENST00000623151 2376 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 MFSD8-218ENST00000641186 4448 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 COX6B1P3-201ENST00000312310 260 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 RNA5SP110-201ENST00000362638 115 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 RN7SKP296-201ENST00000411185 341 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 BX119917.1-201ENST00000432517 502 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 CXCR2P1-202ENST00000443392 1074 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC104837.1-201ENST00000444644 1587 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 RPL23AP64-201ENST00000469465 435 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
SNED1Q8TER0 MIR6811-201ENST00000620409 58 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.06□□□□□ -1.12
SNED1Q8TER0 AC129915.3-201ENST00000634128 948 ntBASIC8.06□□□□□ -1.12
SNED1Q8TER0 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms