Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC093283.1-201ENST00000565306 1075 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 AL513548.2-201ENST00000602994 1207 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
CCNA1P78396 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 AC023632.6-201ENST00000624338 2177 ntBASIC7.77□□□□□ -1.17
CCNA1P78396 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CCNA1P78396 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
CCNA1P78396 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CCNA1P78396 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.77□□□□□ -1.17
CCNA1P78396 COL6A4P1-202ENST00000487147 4317 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.76□□□□□ -1.17
CCNA1P78396 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.76□□□□□ -1.17
CCNA1P78396 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 MIR323B-201ENST00000385269 82 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.76□□□□□ -1.17
CCNA1P78396 HMGN1P6-201ENST00000438508 291 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 RPL26P30-201ENST00000453533 435 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.76□□□□□ -1.17
CCNA1P78396 AC112484.3-201ENST00000505910 329 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 HMGN1P16-201ENST00000508308 283 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AC093664.1-201ENST00000511779 289 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.76□□□□□ -1.17
CCNA1P78396 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AL445383.1-201ENST00000554689 874 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.76□□□□□ -1.17
CCNA1P78396 OR1E3-201ENST00000575608 948 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AC079315.1-201ENST00000602952 623 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 AC111186.1-201ENST00000604684 130 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 SNORA16A-202ENST00000628458 135 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CCNA1P78396 TMCC1P1-201ENST00000518897 1980 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 AC034111.1-201ENST00000562143 3770 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.76□□□□□ -1.17
CCNA1P78396 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CCNA1P78396 PSMC1P4-201ENST00000515236 1327 ntBASIC7.76□□□□□ -1.17
CCNA1P78396 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCNA1P78396 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
CCNA1P78396 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 AC018992.1-201ENST00000523778 2149 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 PPIAP24-201ENST00000328558 471 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 RBBP4P5-201ENST00000398583 1266 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 AL590240.2-201ENST00000413370 894 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CCNA1P78396 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.75□□□□□ -1.17
CCNA1P78396 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.75□□□□□ -1.17
CCNA1P78396 AL390728.3-201ENST00000452704 270 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 AC144530.1-201ENST00000452862 555 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 H3F3AP5-201ENST00000475267 429 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CCNA1P78396 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CCNA1P78396 AC024451.1-201ENST00000508013 779 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 IGKV2-4-201ENST00000523070 340 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 OR52K3P-201ENST00000531655 943 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.75□□□□□ -1.17
CCNA1P78396 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.75□□□□□ -1.17
CCNA1P78396 RN7SL199P-201ENST00000578752 281 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 RN7SL656P-201ENST00000579044 281 ntBASIC7.75□□□□□ -1.17
CCNA1P78396 RN7SL270P-201ENST00000579643 281 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms