Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC091133.5-201ENST00000603088 301 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AC090181.3-201ENST00000624777 1514 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 AC005261.2-201ENST00000593427 4258 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 SALL4P7-201ENST00000555779 3120 ntBASIC8.11□□□□□ -1.11
RHBDL3P58872 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.11□□□□□ -1.11
RHBDL3P58872 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RHBDL3P58872 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RHBDL3P58872 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 MTCO1P22-201ENST00000604619 1360 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC006058.1-201ENST00000568686 5067 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RHBDL3P58872 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 RNA5SP321-201ENST00000362722 111 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RHBDL3P58872 RNU6-316P-201ENST00000391027 107 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 SNORA11.5-201ENST00000408163 128 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 GAPDHP57-201ENST00000424400 585 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 OR6R1P-201ENST00000431838 940 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 FTH1P20-201ENST00000434913 548 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 COL11A2P1-205ENST00000441798 676 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC245291.3-201ENST00000443400 292 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 RPS14P8-201ENST00000478778 369 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 RN7SL649P-201ENST00000496974 275 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC106822.1-201ENST00000502647 526 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.1□□□□□ -1.11
RHBDL3P58872 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC089999.3-201ENST00000622440 577 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC120036.2-201ENST00000509729 1474 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 RACGAP1P-201ENST00000550663 1879 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.1□□□□□ -1.11
RHBDL3P58872 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
RHBDL3P58872 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC034111.1-201ENST00000562143 3770 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 AL359396.1-201ENST00000623151 2376 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AL078595.2-201ENST00000605309 1780 ntBASIC8.1□□□□□ -1.11
RHBDL3P58872 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RHBDL3P58872 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.1□□□□□ -1.11
RHBDL3P58872 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RHBDL3P58872 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
RHBDL3P58872 AC245036.1-201ENST00000391727 309 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 AL139184.1-202ENST00000422303 222 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 RPL26P30-201ENST00000453533 435 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 HNRNPDLP2-201ENST00000455248 751 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC8.09□□□□□ -1.11
RHBDL3P58872 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.09□□□□□ -1.11
RHBDL3P58872 RN7SL104P-201ENST00000498686 293 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 MORF4L2P1-201ENST00000503761 858 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 AC091849.1-201ENST00000509920 121 ntBASIC8.09□□□□□ -1.11
RHBDL3P58872 RNU6-943P-201ENST00000516960 98 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms