Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 FANCD2P2-201ENST00000437591 1400 ntBASIC7.16□□□□□ -1.26
LHX1P48742 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.16□□□□□ -1.26
LHX1P48742 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
LHX1P48742 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LHX1P48742 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.15□□□□□ -1.26
LHX1P48742 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LHX1P48742 RACGAP1P-201ENST00000550663 1879 ntBASIC7.15□□□□□ -1.26
LHX1P48742 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
LHX1P48742 AC005839.1-201ENST00000624148 3213 ntBASIC7.15□□□□□ -1.26
LHX1P48742 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LHX1P48742 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LHX1P48742 AC093278.2-201ENST00000564956 2485 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AL359694.1-201ENST00000403247 604 ntBASIC7.15□□□□□ -1.26
LHX1P48742 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LHX1P48742 RN7SKP296-201ENST00000411185 341 ntBASIC7.15□□□□□ -1.26
LHX1P48742 GAPDHP19-201ENST00000431768 1005 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AC245452.2-201ENST00000435222 392 ntBASIC7.15□□□□□ -1.26
LHX1P48742 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.15□□□□□ -1.26
LHX1P48742 UBBP5-201ENST00000446970 266 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.15□□□□□ -1.26
LHX1P48742 OR52H2P-201ENST00000514607 902 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC7.15□□□□□ -1.26
LHX1P48742 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC7.15□□□□□ -1.26
LHX1P48742 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.15□□□□□ -1.26
LHX1P48742 AC005519.1-201ENST00000554490 601 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC7.15□□□□□ -1.26
LHX1P48742 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.15□□□□□ -1.26
LHX1P48742 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.15□□□□□ -1.26
LHX1P48742 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.15□□□□□ -1.26
LHX1P48742 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.15□□□□□ -1.26
LHX1P48742 AL390877.1-201ENST00000605704 214 ntBASIC7.15□□□□□ -1.26
LHX1P48742 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.15□□□□□ -1.26
LHX1P48742 RAB28P4-201ENST00000622233 665 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AL354702.2-202ENST00000641481 890 ntBASIC7.15□□□□□ -1.26
LHX1P48742 AC119674.1-204ENST00000641348 1343 ntBASIC7.15□□□□□ -1.26
LHX1P48742 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LHX1P48742 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LHX1P48742 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
LHX1P48742 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
LHX1P48742 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.15□□□□□ -1.27
LHX1P48742 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.15□□□□□ -1.27
LHX1P48742 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LHX1P48742 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.15□□□□□ -1.27
LHX1P48742 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.14□□□□□ -1.27
LHX1P48742 AL359922.2-201ENST00000581788 3017 ntBASIC7.14□□□□□ -1.27
LHX1P48742 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
LHX1P48742 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
LHX1P48742 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.14□□□□□ -1.27
LHX1P48742 SNORA38B-201ENST00000363524 131 ntBASIC7.14□□□□□ -1.27
LHX1P48742 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 MIR541-201ENST00000401360 84 ntBASIC7.14□□□□□ -1.27
LHX1P48742 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 AC008753.1-201ENST00000423096 284 ntBASIC7.14□□□□□ -1.27
LHX1P48742 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 KF459542.1-201ENST00000450908 553 ntBASIC7.14□□□□□ -1.27
LHX1P48742 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 RN7SL834P-201ENST00000461450 286 ntBASIC7.14□□□□□ -1.27
LHX1P48742 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC7.14□□□□□ -1.27
LHX1P48742 AC117395.1-201ENST00000487390 403 ntBASIC7.14□□□□□ -1.27
LHX1P48742 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.14□□□□□ -1.27
LHX1P48742 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LHX1P48742 AC092375.1-201ENST00000550410 637 ntBASIC7.14□□□□□ -1.27
LHX1P48742 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC7.14□□□□□ -1.27
LHX1P48742 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms