Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 FXNP1-201ENST00000555153 337 ntBASIC6.11□□□□□ -1.43
SOX2P48431 NDUFA3P4-201ENST00000560814 250 ntBASIC6.11□□□□□ -1.43
SOX2P48431 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 SNORA70D-201ENST00000578836 135 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.11□□□□□ -1.43
SOX2P48431 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.11□□□□□ -1.43
SOX2P48431 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 RPAP2P1-201ENST00000603626 1168 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AP001554.1-201ENST00000604533 376 ntBASIC6.11□□□□□ -1.43
SOX2P48431 OR6L2P-201ENST00000608207 925 ntBASIC6.11□□□□□ -1.43
SOX2P48431 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 FAM74A6-203ENST00000615956 481 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 AC078909.2-201ENST00000620584 398 ntBASIC6.11□□□□□ -1.43
SOX2P48431 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 AC131009.3-201ENST00000621809 287 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC073862.4-201ENST00000622982 854 ntBASIC6.11□□□□□ -1.43
SOX2P48431 AC211433.3-201ENST00000623770 375 ntBASIC6.11□□□□□ -1.43
SOX2P48431 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 OR52B5P-204ENST00000641744 3467 ntBASIC6.11□□□□□ -1.43
SOX2P48431 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.11□□□□□ -1.43
SOX2P48431 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.11□□□□□ -1.43
SOX2P48431 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SOX2P48431 DDX10P2-201ENST00000417796 2614 ntBASIC6.11□□□□□ -1.43
SOX2P48431 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SOX2P48431 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.1□□□□□ -1.43
SOX2P48431 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
SOX2P48431 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 AC068733.2-201ENST00000605434 1418 ntBASIC6.1□□□□□ -1.43
SOX2P48431 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 FO082842.1-201ENST00000423552 1370 ntBASIC6.1□□□□□ -1.43
SOX2P48431 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 NEK2P4-201ENST00000425793 1329 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AL512310.3-201ENST00000547023 1335 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC119674.1-204ENST00000641348 1343 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC010329.1-201ENST00000593903 8328 ntBASIC6.1□□□□□ -1.43
SOX2P48431 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SOX2P48431 EEF1B2P8-201ENST00000414101 671 ntBASIC6.1□□□□□ -1.43
SOX2P48431 TAS2R2P-201ENST00000421146 910 ntBASIC6.1□□□□□ -1.43
SOX2P48431 OR5P4P-201ENST00000424698 917 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 MTND4LP14-201ENST00000429447 288 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC009299.1-201ENST00000429684 717 ntBASIC6.1□□□□□ -1.43
SOX2P48431 NPM1P25-201ENST00000429734 854 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 GTF2F2P2-201ENST00000445825 721 ntBASIC6.1□□□□□ -1.43
SOX2P48431 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 MTND5P8-201ENST00000449817 1083 ntBASIC6.1□□□□□ -1.43
SOX2P48431 MORF4L1P4-201ENST00000450245 976 ntBASIC6.1□□□□□ -1.43
SOX2P48431 RPL34P22-201ENST00000468193 318 ntBASIC6.1□□□□□ -1.43
SOX2P48431 RN7SL152P-201ENST00000484176 298 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC097263.1-201ENST00000496795 606 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC106774.2-201ENST00000510266 406 ntBASIC6.1□□□□□ -1.43
SOX2P48431 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 EGLN3P1-201ENST00000541727 720 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.1□□□□□ -1.43
SOX2P48431 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.1□□□□□ -1.43
SOX2P48431 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC6.1□□□□□ -1.43
SOX2P48431 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 RPS7P1-201ENST00000571702 585 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX2P48431 AC026951.2-201ENST00000613847 241 ntBASIC6.1□□□□□ -1.43
SOX2P48431 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.1□□□□□ -1.43
SOX2P48431 AC011471.4-201ENST00000638271 216 ntBASIC6.1□□□□□ -1.43
SOX2P48431 AC009452.1-201ENST00000640823 606 ntBASIC6.1□□□□□ -1.43
SOX2P48431 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX2P48431 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX2P48431 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms