Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC021220.1-201ENST00000507445 630 ntBASIC9.39□□□□□ -0.91
CPS1P31327 AC083906.1-201ENST00000509298 406 ntBASIC9.39□□□□□ -0.91
CPS1P31327 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC9.39□□□□□ -0.91
CPS1P31327 AC004477.3-201ENST00000614061 590 ntBASIC9.39□□□□□ -0.91
CPS1P31327 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CPS1P31327 AC008555.1-201ENST00000561778 2757 ntBASIC9.39□□□□□ -0.91
CPS1P31327 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
CPS1P31327 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC9.39□□□□□ -0.91
CPS1P31327 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CPS1P31327 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.39□□□□□ -0.91
CPS1P31327 RACGAP1P-201ENST00000550663 1879 ntBASIC9.39□□□□□ -0.91
CPS1P31327 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
CPS1P31327 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.39□□□□□ -0.91
CPS1P31327 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
CPS1P31327 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
CPS1P31327 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 SNORA38B-201ENST00000363524 131 ntBASIC9.38□□□□□ -0.91
CPS1P31327 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
CPS1P31327 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 MTND6P1-201ENST00000417434 424 ntBASIC9.38□□□□□ -0.91
CPS1P31327 AL929472.1-201ENST00000417484 429 ntBASIC9.38□□□□□ -0.91
CPS1P31327 RPS7P12-201ENST00000422385 582 ntBASIC9.38□□□□□ -0.91
CPS1P31327 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC9.38□□□□□ -0.91
CPS1P31327 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC9.38□□□□□ -0.91
CPS1P31327 RNA5SP340-201ENST00000517132 107 ntBASIC9.38□□□□□ -0.91
CPS1P31327 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC9.38□□□□□ -0.91
CPS1P31327 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC9.38□□□□□ -0.91
CPS1P31327 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 TBCA-209ENST00000522370 435 ntTSL 3 BASIC9.38□□□□□ -0.91
CPS1P31327 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC9.38□□□□□ -0.91
CPS1P31327 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC9.38□□□□□ -0.91
CPS1P31327 AP005136.2-201ENST00000583253 1049 ntBASIC9.38□□□□□ -0.91
CPS1P31327 AC061975.7-201ENST00000592016 2692 ntBASIC9.38□□□□□ -0.91
CPS1P31327 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC9.38□□□□□ -0.91
CPS1P31327 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
CPS1P31327 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
CPS1P31327 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC9.38□□□□□ -0.91
CPS1P31327 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
CPS1P31327 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 FGG-205ENST00000407946 1636 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC9.37□□□□□ -0.91
CPS1P31327 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
CPS1P31327 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC9.37□□□□□ -0.91
CPS1P31327 AL121776.1-201ENST00000429337 372 ntBASIC9.37□□□□□ -0.91
CPS1P31327 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 AL627308.1-201ENST00000435693 821 ntBASIC9.37□□□□□ -0.91
CPS1P31327 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
CPS1P31327 TVP23CP1-201ENST00000450317 639 ntBASIC9.37□□□□□ -0.91
CPS1P31327 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 RN7SL799P-201ENST00000475891 298 ntBASIC9.37□□□□□ -0.91
CPS1P31327 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC9.37□□□□□ -0.91
CPS1P31327 AC036111.2-201ENST00000533247 901 ntBASIC9.37□□□□□ -0.91
CPS1P31327 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC9.37□□□□□ -0.91
CPS1P31327 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 AC092332.1-201ENST00000563684 829 ntBASIC9.37□□□□□ -0.91
CPS1P31327 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 OR8B9P-202ENST00000642028 5216 ntBASIC9.37□□□□□ -0.91
CPS1P31327 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.37□□□□□ -0.91
CPS1P31327 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
CPS1P31327 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC9.37□□□□□ -0.91
CPS1P31327 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CPS1P31327 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CPS1P31327 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC9.36□□□□□ -0.91
CPS1P31327 MIR130B-202ENST00000385018 82 ntBASIC9.36□□□□□ -0.91
CPS1P31327 RPL5P20-201ENST00000403848 896 ntBASIC9.36□□□□□ -0.91
CPS1P31327 CRYGGP-201ENST00000443337 145 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AC011476.1-201ENST00000466725 307 ntBASIC9.36□□□□□ -0.91
CPS1P31327 ATG10-208ENST00000513634 618 ntTSL 2 BASIC9.36□□□□□ -0.91
CPS1P31327 RNA5SP418-201ENST00000515951 117 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC9.36□□□□□ -0.91
CPS1P31327 MIR1273E-201ENST00000581165 102 ntBASIC9.36□□□□□ -0.91
CPS1P31327 AP001264.1-201ENST00000620602 703 ntBASIC9.36□□□□□ -0.91
CPS1P31327 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC9.36□□□□□ -0.91
CPS1P31327 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms