Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
DEPDC4Q8N2C3 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 OVGP1-201ENST00000369732 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RNA5SP69-201ENST00000364477 117 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LCN1P1-201ENST00000372031 505 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SUGT1P2-201ENST00000379452 992 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RNA5SP105-201ENST00000391123 113 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MED28P1-201ENST00000399158 571 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC004448.2-201ENST00000422360 586 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 TRIM43CP-201ENST00000422468 1028 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RPL7P44-201ENST00000424827 742 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MTCO1P54-201ENST00000430139 712 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 UBE2V1P8-201ENST00000437166 265 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC093155.1-201ENST00000440164 826 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ZEB1-AS1-203ENST00000441257 585 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RPL5P10-201ENST00000445207 894 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL008627.1-201ENST00000446953 486 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 WASF1P1-201ENST00000447560 1131 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL157714.1-201ENST00000448964 625 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RPL31P58-201ENST00000469001 379 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 PGBD4P1-201ENST00000473644 407 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC117395.1-201ENST00000487390 403 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RNA5SP101-201ENST00000517036 108 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 RN7SKP105-201ENST00000517192 314 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC018554.2-201ENST00000563482 261 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC100843.3-201ENST00000591796 259 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC112220.3-201ENST00000605502 502 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC113554.1-201ENST00000606284 490 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC008592.5-201ENST00000607856 547 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC004067.1-201ENST00000608733 700 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AL513479.1-201ENST00000611376 585 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 LINC01320-209ENST00000625995 928 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC073869.7-201ENST00000640874 297 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AP002364.1-201ENST00000623330 3386 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 MAPK6PS3-201ENST00000403865 2162 ntBASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.98□□□□□ -1.13
DEPDC4Q8N2C3 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms