Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 BX119917.1-201ENST00000432517 502 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 ACTBP12-201ENST00000435871 418 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 IFNWP5-201ENST00000445100 588 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC002366.1-201ENST00000446186 1190 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 NMNAT1P3-201ENST00000457517 888 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC007547.2-201ENST00000468802 360 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RN7SL496P-201ENST00000470372 290 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RN7SKP34-201ENST00000516142 244 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RNA5SP422-201ENST00000516778 111 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC067904.2-201ENST00000517322 1283 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC130364.2-201ENST00000528639 604 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC015802.2-201ENST00000589690 189 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL133247.2-201ENST00000603236 482 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC090186.1-201ENST00000605991 572 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL109930.1-201ENST00000606932 724 ntTSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC016717.3-201ENST00000624730 554 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC093495.1-212ENST00000630173 1162 ntTSL 5 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL121594.6-201ENST00000633440 261 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 OR5AK4P-201ENST00000635912 903 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC011815.2-201ENST00000618230 2021 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AL391262.1-201ENST00000556558 1992 ntBASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC8.37□□□□□ -1.07
FOXR1Q6PIV2 AC061975.7-201ENST00000592016 2692 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 EEF1A1P13-201ENST00000503537 1389 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 APOM-202ENST00000375918 922 ntTSL 2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 MIR185-201ENST00000385288 82 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 DEFB108C-201ENST00000400154 252 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 RN7SKP136-201ENST00000410927 300 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 PPIAP2-201ENST00000414143 492 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 RPL23AP18-201ENST00000416139 468 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LINC01363-201ENST00000426709 971 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 FTH1P10-202ENST00000430907 550 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC245452.2-201ENST00000435222 392 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC068135.1-201ENST00000446164 246 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 CBX1P5-201ENST00000475330 559 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 OR9N1P-201ENST00000491296 333 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC068531.1-201ENST00000502398 195 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 MTCO2P30-201ENST00000503662 364 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC027338.2-201ENST00000504382 526 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 CDC42P4-201ENST00000510507 563 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 SNRPCP8-201ENST00000514820 211 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 RNU6-319P-201ENST00000516025 108 ntBASIC8.36□□□□□ -1.07
FOXR1Q6PIV2 SCARNA20.3-201ENST00000516913 131 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms