Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 TDGP1-201ENST00000543961 1229 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC037479.1-201ENST00000558361 625 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.57□□□□□ -1.52
LMO4P61968 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.57□□□□□ -1.52
LMO4P61968 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.57□□□□□ -1.52
LMO4P61968 AC011891.2-201ENST00000604949 397 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC012676.3-201ENST00000614983 479 ntBASIC5.57□□□□□ -1.52
LMO4P61968 AC009831.5-201ENST00000624000 3189 ntBASIC5.57□□□□□ -1.52
LMO4P61968 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 Z97989.1-201ENST00000531702 2421 ntBASIC5.57□□□□□ -1.52
LMO4P61968 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LMO4P61968 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC5.57□□□□□ -1.52
LMO4P61968 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LMO4P61968 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 RACGAP1P-201ENST00000550663 1879 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 MIR199B-201ENST00000384849 110 ntBASIC5.56□□□□□ -1.52
LMO4P61968 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.56□□□□□ -1.52
LMO4P61968 MRPS21P5-201ENST00000417885 231 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 BX119917.1-201ENST00000432517 502 ntBASIC5.56□□□□□ -1.52
LMO4P61968 ARMC4P1-201ENST00000438905 707 ntBASIC5.56□□□□□ -1.52
LMO4P61968 TIMM8BP2-201ENST00000445940 251 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 RN7SL382P-201ENST00000482631 282 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.56□□□□□ -1.52
LMO4P61968 PABPC1P1-201ENST00000506347 591 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC093870.1-201ENST00000506837 213 ntBASIC5.56□□□□□ -1.52
LMO4P61968 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC093664.1-201ENST00000511779 289 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC016144.1-201ENST00000548175 1087 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.56□□□□□ -1.52
LMO4P61968 AC026956.1-201ENST00000558741 396 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AC105036.1-201ENST00000566222 271 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AL365223.1-201ENST00000574864 1297 ntBASIC5.56□□□□□ -1.52
LMO4P61968 AL132796.3-201ENST00000624703 900 ntBASIC5.56□□□□□ -1.52
LMO4P61968 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 TMC3-AS1-206ENST00000612811 2726 ntBASIC5.56□□□□□ -1.52
LMO4P61968 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 CREM-208ENST00000361599 2170 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC5.56□□□□□ -1.52
LMO4P61968 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC5.56□□□□□ -1.52
LMO4P61968 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LMO4P61968 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 FLJ42393-201ENST00000623801 2270 ntBASIC5.55□□□□□ -1.52
LMO4P61968 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LMO4P61968 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC5.55□□□□□ -1.52
LMO4P61968 UG0898H09-202ENST00000623646 7040 ntBASIC5.55□□□□□ -1.52
LMO4P61968 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LMO4P61968 RPL12P13-201ENST00000310055 497 ntBASIC5.55□□□□□ -1.52
LMO4P61968 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms