Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL078595.2-201ENST00000605309 1780 ntBASIC6.51□□□□□ -1.37
SUMO3P55854 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SUMO3P55854 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SUMO3P55854 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 UG0898H09-202ENST00000623646 7040 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 NAMPTP1-201ENST00000440465 2514 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 RNU6-650P-201ENST00000365658 111 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 RN7SKP62-201ENST00000384539 329 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 RNA5SP177-201ENST00000410122 107 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 RN7SKP254-201ENST00000410685 310 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 NFU1P1-201ENST00000413128 774 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 RPL12P10-201ENST00000413498 498 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.5□□□□□ -1.37
SUMO3P55854 UBE2D3P3-201ENST00000426992 425 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC019185.3-201ENST00000438805 323 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC106760.2-201ENST00000504159 619 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 AC010374.2-201ENST00000512933 535 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 AC233266.2-201ENST00000567067 528 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC104072.1-201ENST00000568817 668 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AP006587.6-201ENST00000582128 1091 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 MIR4786-201ENST00000583954 80 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC017076.1-201ENST00000607613 578 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 AL138955.1-201ENST00000622881 1040 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC090772.4-201ENST00000623599 362 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AC004943.1-203ENST00000624370 1074 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.5□□□□□ -1.37
SUMO3P55854 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 MAPK10-350ENST00000641777 965 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.5□□□□□ -1.37
SUMO3P55854 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 AL358913.2-201ENST00000553881 1548 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.5□□□□□ -1.37
SUMO3P55854 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SUMO3P55854 TUBBP10-201ENST00000427668 1301 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.5□□□□□ -1.37
SUMO3P55854 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SUMO3P55854 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
SUMO3P55854 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms