Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AL590065.1-201ENST00000603371 4774 ntBASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SSBP3Q9BWW4 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC022150.4-201ENST00000598322 2848 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 RNU6-618P-201ENST00000363518 112 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL139327.1-201ENST00000382988 348 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 MTND4LP20-201ENST00000402379 270 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 MTCYBP5-201ENST00000423752 1135 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 C8orf59P1-201ENST00000429930 303 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ST13P2-201ENST00000438916 1109 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL137074.1-201ENST00000442640 465 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 HIST1H2APS6-201ENST00000448609 364 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL133217.1-201ENST00000450980 425 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 RN7SL282P-201ENST00000479676 297 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 RN7SL869P-201ENST00000497032 300 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC079768.1-201ENST00000503181 711 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 HSPE1P10-201ENST00000508631 558 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC097460.2-201ENST00000511857 741 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC008549.1-201ENST00000512900 643 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 RPL41P2-201ENST00000544920 409 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 OOSP1P2-201ENST00000579644 351 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC004987.4-201ENST00000603383 338 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC012511.1-201ENST00000608140 449 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC109587.1-213ENST00000610844 652 ntTSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL121583.1-201ENST00000612444 682 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC022106.1-201ENST00000612834 766 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC005383.1-201ENST00000622689 534 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AL392088.2-201ENST00000637607 285 ntBASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SSBP3Q9BWW4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 MFSD8-218ENST00000641186 4448 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 AC009166.2-201ENST00000624410 2833 ntBASIC6.37□□□□□ -1.39
SSBP3Q9BWW4 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms