Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
TRAIPQ9BWF2 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 MAPK10-281ENST00000641170 3070 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL031123.2-201ENST00000563225 3325 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC026464.2-201ENST00000567834 2421 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 SNORA30B-201ENST00000365319 129 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RNU6-452P-201ENST00000384406 107 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RNU6-636P-201ENST00000384598 107 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 HMGB3P31-201ENST00000413333 595 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC009237.9-201ENST00000414800 347 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RPS24P7-201ENST00000416921 246 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC025262.1-201ENST00000434563 589 ntTSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL357037.1-201ENST00000454758 322 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RN7SL706P-201ENST00000460079 292 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 NAP1L1P3-201ENST00000462291 880 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RPS7P11-201ENST00000484240 586 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RN7SL569P-201ENST00000494652 288 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 OR7E83P-201ENST00000511021 970 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC097460.2-201ENST00000511857 741 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 OR5M4P-201ENST00000529436 925 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC092133.1-201ENST00000565828 719 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 MIR5705-201ENST00000579870 89 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 U1.22-201ENST00000605806 164 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC079416.3-201ENST00000624479 549 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC017007.4-201ENST00000503353 1352 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 AC100810.3-201ENST00000633189 2240 ntBASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
TRAIPQ9BWF2 MT-RNR2-201ENST00000387347 1559 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 CIR1P2-201ENST00000514821 1342 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 AL133320.1-201ENST00000621423 2352 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 AC108099.1-201ENST00000564402 3258 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 PLPPR1-202ENST00000395056 2318 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 RNU6-244P-201ENST00000391028 104 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 LRRC37BP1-201ENST00000398851 714 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 VN1R33P-201ENST00000411800 887 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 UBTFL2-201ENST00000411859 1191 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 RPL12P27-201ENST00000414870 496 ntBASIC8.56□□□□□ -1.04
TRAIPQ9BWF2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms