Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 ERG-205ENST00000398910 4954 ntTSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC002127.1-201ENST00000421305 225 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AL355433.1-201ENST00000422804 300 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 GAPDHP57-201ENST00000424400 585 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AL163193.1-201ENST00000444895 788 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 RHEBP1-201ENST00000448647 556 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 RPL12P30-201ENST00000488389 499 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 UGT2B29P-201ENST00000509021 973 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC021001.1-201ENST00000518703 987 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 OR10G5P-201ENST00000532733 358 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC092332.1-201ENST00000563684 829 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 AC009108.3-201ENST00000602739 3515 ntBASIC6.6□□□□□ -1.35
RIF1Q5UIP0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.6□□□□□ -1.35
RIF1Q5UIP0 Z82209.2-201ENST00000623410 2012 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RN7SKP160-201ENST00000363804 340 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RN7SL787P-201ENST00000613000 284 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC018992.1-201ENST00000523778 2149 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 DMD-209ENST00000378702 2617 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 HYDIN2-203ENST00000614586 13885 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 DDX43P1-201ENST00000510713 1763 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AL590128.1-201ENST00000433407 286 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC020916.2-201ENST00000591242 360 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC024940.4-201ENST00000605507 246 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 SNORA74.4-201ENST00000607595 199 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AC073389.3-201ENST00000609434 935 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 AL080312.2-201ENST00000613001 630 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 SNX18P10-201ENST00000625014 519 ntBASIC6.59□□□□□ -1.35
RIF1Q5UIP0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
RIF1Q5UIP0 MYLK-220ENST00000578202 1447 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RIF1Q5UIP0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.36
RIF1Q5UIP0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RIF1Q5UIP0 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RIF1Q5UIP0 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC034111.1-201ENST00000562143 3770 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 RNA5SP474-201ENST00000391234 90 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC073850.1-201ENST00000449243 255 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 CFL1P4-201ENST00000451536 498 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC096743.1-201ENST00000485172 319 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 LDHAP1-201ENST00000509421 992 ntBASIC6.58□□□□□ -1.36
RIF1Q5UIP0 AC036111.2-201ENST00000533247 901 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms