Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
H3F3AP84243 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
H3F3AP84243 RN7SKP91-201ENST00000410852 288 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 MEAF6P1-201ENST00000416092 327 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.12□□□□□ -1.43
H3F3AP84243 ETF1P1-206ENST00000427296 984 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.12□□□□□ -1.43
H3F3AP84243 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 AC093829.1-201ENST00000506662 1618 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.12□□□□□ -1.43
H3F3AP84243 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.12□□□□□ -1.43
H3F3AP84243 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.12□□□□□ -1.43
H3F3AP84243 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.12□□□□□ -1.43
H3F3AP84243 AC233699.1-201ENST00000569955 1168 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.12□□□□□ -1.43
H3F3AP84243 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.12□□□□□ -1.43
H3F3AP84243 AC120057.5-201ENST00000623840 154 ntBASIC6.12□□□□□ -1.43
H3F3AP84243 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.12□□□□□ -1.43
H3F3AP84243 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.12□□□□□ -1.43
H3F3AP84243 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
H3F3AP84243 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.12□□□□□ -1.43
H3F3AP84243 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.12□□□□□ -1.43
H3F3AP84243 LPAL2-203ENST00000454031 2498 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 MAPK10-270ENST00000641102 3538 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 AC096992.2-201ENST00000609553 1684 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 AC125603.4-201ENST00000621942 2699 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 RN7SKP257-201ENST00000364525 309 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 RN7SKP189-201ENST00000365042 330 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 SNORA70.3-201ENST00000365075 132 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 RNA5SP355-201ENST00000365317 135 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.11□□□□□ -1.43
H3F3AP84243 MIR187-201ENST00000385062 109 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
H3F3AP84243 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.11□□□□□ -1.43
H3F3AP84243 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.11□□□□□ -1.43
H3F3AP84243 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.11□□□□□ -1.43
H3F3AP84243 RN7SL390P-201ENST00000470634 284 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 UOX-201ENST00000471089 899 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.11□□□□□ -1.43
H3F3AP84243 RN7SL187P-201ENST00000495587 303 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC011352.2-201ENST00000514574 1016 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC096661.1-201ENST00000515870 822 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 PPIAP6-201ENST00000557078 499 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
H3F3AP84243 RN7SL371P-201ENST00000578099 267 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC025287.2-201ENST00000621911 668 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC106782.7-201ENST00000624024 418 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC133555.5-201ENST00000624430 418 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 AC005355.2-201ENST00000625064 484 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 SNORA16A-202ENST00000628458 135 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.11□□□□□ -1.43
H3F3AP84243 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.11□□□□□ -1.43
H3F3AP84243 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 MROH3P-201ENST00000435735 2676 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 CUBNP3-201ENST00000457461 1784 ntBASIC6.11□□□□□ -1.43
H3F3AP84243 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
H3F3AP84243 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.1□□□□□ -1.43
H3F3AP84243 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
H3F3AP84243 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.1□□□□□ -1.43
H3F3AP84243 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms