Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.05□□□□□ -1.28
BRCA2P51587 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
BRCA2P51587 KIAA1755-201ENST00000279024 6429 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 PLCH1-204ENST00000460012 6413 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 MIR375-201ENST00000362103 64 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 AL109941.1-201ENST00000401925 229 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 AC023827.2-201ENST00000566880 1061 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 ZNF322P1-201ENST00000568013 1209 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.04□□□□□ -1.28
BRCA2P51587 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.04□□□□□ -1.28
BRCA2P51587 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.04□□□□□ -1.28
BRCA2P51587 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 RPL23AP85-201ENST00000421838 433 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 AC103563.5-201ENST00000455643 364 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 BX284632.1-201ENST00000478218 541 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 RN7SL466P-201ENST00000497546 295 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 SAMMSON-227ENST00000642114 1199 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC7.04□□□□□ -1.28
BRCA2P51587 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.04□□□□□ -1.28
BRCA2P51587 AL139148.1-201ENST00000427122 680 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 IGLV3-4-201ENST00000432300 244 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 RPL12P3-201ENST00000440080 396 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC7.04□□□□□ -1.28
BRCA2P51587 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.04□□□□□ -1.28
BRCA2P51587 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.04□□□□□ -1.28
BRCA2P51587 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.04□□□□□ -1.28
BRCA2P51587 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.04□□□□□ -1.28
BRCA2P51587 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
BRCA2P51587 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
BRCA2P51587 AC020978.8-201ENST00000571975 3022 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
BRCA2P51587 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 OR7E101P-201ENST00000400428 513 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 RN7SKP161-201ENST00000411110 305 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.03□□□□□ -1.28
BRCA2P51587 RN7SL834P-201ENST00000461450 286 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.03□□□□□ -1.28
BRCA2P51587 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.03□□□□□ -1.28
BRCA2P51587 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.03□□□□□ -1.28
BRCA2P51587 MRPL57P1-201ENST00000621486 265 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC7.03□□□□□ -1.28
BRCA2P51587 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 MYH13-203ENST00000621918 5916 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 AC007842.1-201ENST00000597336 2039 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 ARHGAP20-202ENST00000524756 6180 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
BRCA2P51587 PABPC1P6-201ENST00000445594 1829 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
BRCA2P51587 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.03□□□□□ -1.28
BRCA2P51587 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
BRCA2P51587 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
BRCA2P51587 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
BRCA2P51587 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 RNA5SP375-201ENST00000362975 119 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.03□□□□□ -1.28
BRCA2P51587 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.03□□□□□ -1.28
BRCA2P51587 AL354718.1-201ENST00000619764 589 ntBASIC7.03□□□□□ -1.28
BRCA2P51587 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
BRCA2P51587 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC7.03□□□□□ -1.28
BRCA2P51587 AC245060.4-201ENST00000413293 1121 ntBASIC7.02□□□□□ -1.28
BRCA2P51587 BMS1P17-202ENST00000416720 316 ntBASIC7.02□□□□□ -1.28
BRCA2P51587 AC091390.1-201ENST00000433904 331 ntBASIC7.02□□□□□ -1.28
BRCA2P51587 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms