Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SMARCA4P51532 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SMARCA4P51532 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SMARCA4P51532 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC11.68□□□□□ -0.54
SMARCA4P51532 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC11.68□□□□□ -0.54
SMARCA4P51532 OR13C1P-202ENST00000641378 2919 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 GAPDHP48-201ENST00000436626 961 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AP000281.1-201ENST00000444036 316 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 AC022415.1-202ENST00000486612 523 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC063943.2-201ENST00000495697 534 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 PSMA2P2-201ENST00000504319 686 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC114781.3-201ENST00000512083 142 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 RN7SKP238-201ENST00000516483 249 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC11.68□□□□□ -0.54
SMARCA4P51532 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC11.68□□□□□ -0.54
SMARCA4P51532 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC11.68□□□□□ -0.54
SMARCA4P51532 RNA5SP440-201ENST00000612665 119 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC126175.1-201ENST00000617041 758 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AL357153.4-201ENST00000620487 1016 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC11.68□□□□□ -0.54
SMARCA4P51532 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC11.68□□□□□ -0.54
SMARCA4P51532 USP13-203ENST00000496897 2747 ntTSL 2 BASIC11.68□□□□□ -0.54
SMARCA4P51532 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC11.68□□□□□ -0.54
SMARCA4P51532 XRCC6P5-201ENST00000435236 1795 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC093278.2-201ENST00000564956 2485 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC11.68□□□□□ -0.54
SMARCA4P51532 MIR937-201ENST00000401271 86 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AC023141.3-201ENST00000436698 278 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SMARCA4P51532 AL645936.1-201ENST00000441979 518 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC11.68□□□□□ -0.54
SMARCA4P51532 RPL31P15-201ENST00000449770 338 ntBASIC11.68□□□□□ -0.54
SMARCA4P51532 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC11.68□□□□□ -0.54
SMARCA4P51532 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC11.68□□□□□ -0.54
SMARCA4P51532 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC11.67□□□□□ -0.54
SMARCA4P51532 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC11.67□□□□□ -0.54
SMARCA4P51532 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC11.67□□□□□ -0.54
SMARCA4P51532 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC11.67□□□□□ -0.54
SMARCA4P51532 PRDM10-207ENST00000528746 6182 ntTSL 5 BASIC11.67□□□□□ -0.54
SMARCA4P51532 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC11.67□□□□□ -0.54
SMARCA4P51532 RNA5SP242-201ENST00000364171 118 ntBASIC11.67□□□□□ -0.54
SMARCA4P51532 OR5H7P-201ENST00000514084 930 ntBASIC11.67□□□□□ -0.54
SMARCA4P51532 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC11.67□□□□□ -0.54
SMARCA4P51532 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC11.67□□□□□ -0.54
SMARCA4P51532 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC11.67□□□□□ -0.54
SMARCA4P51532 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC11.67□□□□□ -0.54
SMARCA4P51532 OR7E91P-202ENST00000642062 1198 ntBASIC11.67□□□□□ -0.54
SMARCA4P51532 RN7SKP23-201ENST00000625159 4301 ntBASIC11.67□□□□□ -0.54
SMARCA4P51532 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC11.67□□□□□ -0.54
SMARCA4P51532 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
SMARCA4P51532 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMARCA4P51532 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SMARCA4P51532 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 RARSP1-201ENST00000542842 1418 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC11.66□□□□□ -0.54
SMARCA4P51532 HSPD1P9-201ENST00000420325 1636 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
SMARCA4P51532 OR52B3P-201ENST00000314715 928 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMARCA4P51532 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AC245452.2-201ENST00000435222 392 ntBASIC11.66□□□□□ -0.54
SMARCA4P51532 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC11.66□□□□□ -0.54
SMARCA4P51532 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC11.66□□□□□ -0.54
SMARCA4P51532 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC11.66□□□□□ -0.54
SMARCA4P51532 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms