Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 TAF9BP2-201ENST00000400856 499 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 RPSAP72-201ENST00000407020 358 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 TCEA1P2-201ENST00000420496 906 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.64□□□□□ -1.03
ERCC3P19447 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 PA2G4P1-201ENST00000442248 1197 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 MTND2P8-201ENST00000450555 1025 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AL133480.2-201ENST00000456723 487 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC069306.1-201ENST00000507006 843 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC138409.2-202ENST00000507274 458 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 GAPDHP61-201ENST00000507324 1005 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 CHCHD2P7-201ENST00000508008 452 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC010476.1-201ENST00000519111 851 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 IGKV3D-31-201ENST00000519131 281 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 AC061975.3-201ENST00000583209 244 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 OR7E19P-202ENST00000589942 844 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 SIGLEC31P-201ENST00000594237 551 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC005518.2-201ENST00000603254 282 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.64□□□□□ -1.03
ERCC3P19447 U47924.1-201ENST00000606539 434 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC018690.1-201ENST00000608144 626 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC007671.1-201ENST00000616957 830 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC244100.4-201ENST00000617747 388 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC106782.7-201ENST00000624024 418 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC133555.5-201ENST00000624430 418 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
ERCC3P19447 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
ERCC3P19447 AC119674.1-202ENST00000641333 1860 ntBASIC8.64□□□□□ -1.03
ERCC3P19447 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
ERCC3P19447 KRT23-202ENST00000436344 1485 ntTSL 2 BASIC8.64□□□□□ -1.03
ERCC3P19447 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
ERCC3P19447 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 FLJ42393-201ENST00000623801 2270 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
ERCC3P19447 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
ERCC3P19447 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 AC010132.2-201ENST00000295493 1043 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AC023886.2-201ENST00000321285 411 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
ERCC3P19447 AL356968.2-201ENST00000412769 1257 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 GAPDHP69-201ENST00000425504 1008 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 VN1R35P-201ENST00000428102 693 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.63□□□□□ -1.03
ERCC3P19447 AL354872.1-201ENST00000456361 967 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AC008799.2-201ENST00000484429 647 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AL079303.1-201ENST00000486611 463 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 MTND2P38-201ENST00000522536 667 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC118942.1-201ENST00000529674 1035 ntBASIC8.63□□□□□ -1.03
ERCC3P19447 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC8.63□□□□□ -1.03
ERCC3P19447 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC8.63□□□□□ -1.03
ERCC3P19447 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms