Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AP002833.3-201ENST00000625075 2265 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 RNA5SP279-201ENST00000365513 117 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 RN7SKP129-201ENST00000410288 299 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 COL11A2P1-205ENST00000441798 676 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 RPL26P30-201ENST00000453533 435 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 RPL12P7-201ENST00000493832 494 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC055733.3-201ENST00000505214 523 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 AL590065.1-201ENST00000603371 4774 ntBASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SHROOM1Q2M3G4 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 RNA5SP321-201ENST00000362722 111 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 RNU1-55P-201ENST00000365510 158 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 MIR621-201ENST00000384919 96 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 VIM2P-201ENST00000402383 1294 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL139158.1-201ENST00000424719 340 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 PGBD4P1-201ENST00000473644 407 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC093870.1-201ENST00000506837 213 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 HMGN1P16-201ENST00000508308 283 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL445383.1-201ENST00000554689 874 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC037479.1-201ENST00000558361 625 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 MT1CP-201ENST00000567054 174 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC134669.1-201ENST00000581275 672 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC245052.7-201ENST00000601161 359 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL499605.1-201ENST00000604628 403 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 MIR6806-201ENST00000622141 64 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AL035425.4-201ENST00000624509 1063 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 AC073488.9-201ENST00000631601 754 ntBASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.93□□□□□ -1.14
SHROOM1Q2M3G4 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 HYDIN2-203ENST00000614586 13885 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RNU1-65P-201ENST00000363919 148 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RNA5SP77-201ENST00000365394 120 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RPL5P5-201ENST00000392009 893 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 MRPS21P5-201ENST00000417885 231 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 GAPDHP57-201ENST00000424400 585 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RPL5P34-201ENST00000426545 891 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 PAICSP2-201ENST00000429118 1150 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 RPL5P9-201ENST00000448118 886 ntBASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.92□□□□□ -1.14
SHROOM1Q2M3G4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.92□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms