Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX2P48431 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 AC241584.2-201ENST00000637142 2090 ntBASIC6.15□□□□□ -1.42
SOX2P48431 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 RNA5SP472-201ENST00000363868 119 ntBASIC6.15□□□□□ -1.42
SOX2P48431 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 FAM204BP-201ENST00000369171 701 ntBASIC6.15□□□□□ -1.42
SOX2P48431 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX2P48431 OR4F7P-201ENST00000402444 931 ntBASIC6.15□□□□□ -1.42
SOX2P48431 OR4F1P-201ENST00000405102 938 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX2P48431 GNAI2P2-201ENST00000417003 916 ntBASIC6.15□□□□□ -1.42
SOX2P48431 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SOX2P48431 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX2P48431 OR4F2P-201ENST00000424047 938 ntBASIC6.15□□□□□ -1.42
SOX2P48431 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX2P48431 AP006193.1-201ENST00000440724 485 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX2P48431 RPL31P53-201ENST00000457065 348 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AP005202.1-201ENST00000489915 867 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC023818.1-201ENST00000498379 384 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 IGLV1-62-201ENST00000518003 441 ntBASIC6.15□□□□□ -1.42
SOX2P48431 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
SOX2P48431 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.15□□□□□ -1.42
SOX2P48431 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.15□□□□□ -1.42
SOX2P48431 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.15□□□□□ -1.42
SOX2P48431 AC111186.1-201ENST00000604684 130 ntBASIC6.15□□□□□ -1.42
SOX2P48431 RN7SL760P-201ENST00000607344 270 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC135803.1-201ENST00000608748 565 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC110792.4-201ENST00000609843 298 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.15□□□□□ -1.42
SOX2P48431 AC127071.1-201ENST00000624997 712 ntBASIC6.15□□□□□ -1.42
SOX2P48431 AL139254.2-202ENST00000641937 1156 ntBASIC6.15□□□□□ -1.42
SOX2P48431 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SOX2P48431 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SOX2P48431 OR4G1P-202ENST00000641173 1788 ntBASIC6.15□□□□□ -1.43
SOX2P48431 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.15□□□□□ -1.43
SOX2P48431 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.15□□□□□ -1.43
SOX2P48431 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.15□□□□□ -1.43
SOX2P48431 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SOX2P48431 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.15□□□□□ -1.43
SOX2P48431 AL592494.2-201ENST00000425455 1548 ntBASIC6.15□□□□□ -1.43
SOX2P48431 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.14□□□□□ -1.43
SOX2P48431 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.14□□□□□ -1.43
SOX2P48431 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 OLMALINC-203ENST00000641087 3779 ntBASIC6.14□□□□□ -1.43
SOX2P48431 OR5E1P-201ENST00000305754 927 ntBASIC6.14□□□□□ -1.43
SOX2P48431 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 IFNA16-201ENST00000380216 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SOX2P48431 TRAV35-201ENST00000390462 330 ntBASIC6.14□□□□□ -1.43
SOX2P48431 RPL36P18-201ENST00000419316 318 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AJ239321.1-201ENST00000424255 564 ntBASIC6.14□□□□□ -1.43
SOX2P48431 FDPSP8-201ENST00000438304 1089 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 C1DP3-201ENST00000455013 423 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AC013429.1-201ENST00000456604 422 ntBASIC6.14□□□□□ -1.43
SOX2P48431 RPSAP7-201ENST00000456871 885 ntBASIC6.14□□□□□ -1.43
SOX2P48431 RN7SL508P-201ENST00000464472 303 ntBASIC6.14□□□□□ -1.43
SOX2P48431 RN7SL58P-201ENST00000473445 294 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AC023794.3-204ENST00000510754 236 ntBASIC6.14□□□□□ -1.43
SOX2P48431 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 GLYATL1P4-201ENST00000529326 906 ntBASIC6.14□□□□□ -1.43
SOX2P48431 OR9L1P-201ENST00000529493 933 ntBASIC6.14□□□□□ -1.43
SOX2P48431 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC6.14□□□□□ -1.43
SOX2P48431 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.14□□□□□ -1.43
SOX2P48431 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SOX2P48431 MIR5095-201ENST00000578844 88 ntBASIC6.14□□□□□ -1.43
SOX2P48431 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.14□□□□□ -1.43
SOX2P48431 AP003117.1-201ENST00000602771 554 ntBASIC6.14□□□□□ -1.43
SOX2P48431 OR4H6P-202ENST00000603819 340 ntBASIC6.14□□□□□ -1.43
SOX2P48431 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms