Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC092421.1-201ENST00000448148 418 ntBASIC5.81□□□□□ -1.48
CCL1P22362 RN7SL654P-201ENST00000479178 292 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC092824.1-201ENST00000483524 576 ntBASIC5.81□□□□□ -1.48
CCL1P22362 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 AC107952.1-201ENST00000524200 376 ntBASIC5.81□□□□□ -1.48
CCL1P22362 OR52K3P-201ENST00000531655 943 ntBASIC5.81□□□□□ -1.48
CCL1P22362 PDCL3P1-201ENST00000534575 734 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC140063.1-201ENST00000541343 259 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.81□□□□□ -1.48
CCL1P22362 AC103968.1-201ENST00000557841 573 ntBASIC5.81□□□□□ -1.48
CCL1P22362 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 MIR4258-201ENST00000580920 91 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
CCL1P22362 AC011921.2-201ENST00000589465 152 ntBASIC5.81□□□□□ -1.48
CCL1P22362 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 AL590032.1-201ENST00000604920 252 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC097467.4-201ENST00000605504 141 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC083964.1-201ENST00000607549 630 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AL121782.1-201ENST00000611242 413 ntBASIC5.81□□□□□ -1.48
CCL1P22362 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CCL1P22362 AC245407.2-201ENST00000614199 451 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC004241.2-201ENST00000614562 444 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC012254.5-201ENST00000623573 478 ntBASIC5.81□□□□□ -1.48
CCL1P22362 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.81□□□□□ -1.48
CCL1P22362 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.81□□□□□ -1.48
CCL1P22362 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 ZNF806-201ENST00000438300 1774 ntBASIC5.8□□□□□ -1.48
CCL1P22362 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 TNPO1P2-201ENST00000426249 2665 ntBASIC5.8□□□□□ -1.48
CCL1P22362 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 AC062022.1-201ENST00000451026 1684 ntBASIC5.8□□□□□ -1.48
CCL1P22362 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CCL1P22362 RNA5SP474-201ENST00000391234 90 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AL049697.3-201ENST00000406493 982 ntBASIC5.8□□□□□ -1.48
CCL1P22362 FTH1P26-201ENST00000406512 701 ntBASIC5.8□□□□□ -1.48
CCL1P22362 RNU2-5P-201ENST00000410533 180 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.8□□□□□ -1.48
CCL1P22362 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.8□□□□□ -1.48
CCL1P22362 RPS10P21-201ENST00000430654 475 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC114402.2-201ENST00000432760 643 ntBASIC5.8□□□□□ -1.48
CCL1P22362 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.8□□□□□ -1.48
CCL1P22362 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.8□□□□□ -1.48
CCL1P22362 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.8□□□□□ -1.48
CCL1P22362 RPL7AP71-201ENST00000451120 739 ntBASIC5.8□□□□□ -1.48
CCL1P22362 RN7SL216P-201ENST00000471607 298 ntBASIC5.8□□□□□ -1.48
CCL1P22362 RN7SL518P-201ENST00000491887 280 ntBASIC5.8□□□□□ -1.48
CCL1P22362 RN7SL776P-201ENST00000493390 268 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AC253576.1-201ENST00000511645 1156 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 VDAC2P2-201ENST00000544463 901 ntBASIC5.8□□□□□ -1.48
CCL1P22362 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCL1P22362 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.8□□□□□ -1.48
CCL1P22362 MIR4685-201ENST00000578185 69 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.8□□□□□ -1.48
CCL1P22362 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.8□□□□□ -1.48
CCL1P22362 AC106782.7-201ENST00000624024 418 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC133555.5-201ENST00000624430 418 ntBASIC5.8□□□□□ -1.48
CCL1P22362 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.8□□□□□ -1.48
CCL1P22362 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms