Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.06□□□□□ -1.12
HLA-DOAP06340 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 IPO7P2-201ENST00000451446 1750 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC132219.2-201ENST00000624416 2327 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 RPL9P21-201ENST00000392269 505 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 GAPDHP37-201ENST00000442317 968 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 OR52E7P-201ENST00000452394 933 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 SSX8-201ENST00000506270 579 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC116917.1-201ENST00000520558 305 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AP001000.1-201ENST00000526843 742 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC087575.1-201ENST00000585087 229 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC011500.1-201ENST00000601963 469 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC061999.1-201ENST00000624454 177 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AL035425.4-201ENST00000624509 1063 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
HLA-DOAP06340 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 AC104837.1-201ENST00000444644 1587 ntBASIC8.05□□□□□ -1.12
HLA-DOAP06340 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
HLA-DOAP06340 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-DOAP06340 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-DOAP06340 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-DOAP06340 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-DOAP06340 RNA5SP321-201ENST00000362722 111 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 RPL7AP51-201ENST00000422016 760 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC017099.1-201ENST00000448261 1028 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 RPL7AP23-201ENST00000482625 776 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 RPL29P23-201ENST00000486188 442 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
HLA-DOAP06340 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AC092130.1-201ENST00000565531 531 ntTSL 4 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 NDUFB9P1-201ENST00000604683 510 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 AL008582.1-201ENST00000609612 442 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 MIR7854-201ENST00000620068 65 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 RAB28P4-201ENST00000622233 665 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 AL596275.2-207ENST00000641188 675 ntBASIC8.04□□□□□ -1.12
HLA-DOAP06340 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.04□□□□□ -1.12
HLA-DOAP06340 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms