Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC073857.1-201ENST00000625082 1054 ntBASIC6.29□□□□□ -1.4
SPTA1P02549 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
SPTA1P02549 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC6.29□□□□□ -1.4
SPTA1P02549 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SPTA1P02549 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SPTA1P02549 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SPTA1P02549 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 IL5RA-203ENST00000383846 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.28□□□□□ -1.4
SPTA1P02549 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC6.28□□□□□ -1.4
SPTA1P02549 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 AL049776.1-201ENST00000624600 2025 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 AC009784.1-201ENST00000426484 460 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 DNAJC19P5-201ENST00000443295 316 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 MTND6P16-201ENST00000504006 520 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 HMGN1P17-201ENST00000513734 295 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 SNRPCP6-201ENST00000528310 210 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 SMIM12P1-201ENST00000603004 274 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 LYARP1-201ENST00000436977 1501 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 DNM1P47-203ENST00000571780 12667 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC6.28□□□□□ -1.4
SPTA1P02549 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 DDX10P2-201ENST00000417796 2614 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.28□□□□□ -1.4
SPTA1P02549 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 U3.18-201ENST00000390880 216 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 AC004386.1-201ENST00000393214 761 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 YWHAZP6-201ENST00000399764 738 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 IGKV2D-38-201ENST00000518423 240 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 AC010547.6-201ENST00000571789 193 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.28□□□□□ -1.4
SPTA1P02549 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.28□□□□□ -1.4
SPTA1P02549 AC010329.1-201ENST00000593903 8328 ntBASIC6.28□□□□□ -1.4
SPTA1P02549 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SPTA1P02549 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SPTA1P02549 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SPTA1P02549 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.27□□□□□ -1.41
SPTA1P02549 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC007406.5-201ENST00000570140 3170 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 LCOR-201ENST00000286067 4542 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 RHEBP1-201ENST00000448647 556 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 RN7SL88P-201ENST00000480166 299 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 RPL7L1P4-201ENST00000513004 707 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 HSD3BP3-201ENST00000514706 994 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AC079905.1-201ENST00000549280 475 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.27□□□□□ -1.41
SPTA1P02549 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 AC067773.1-201ENST00000603284 1094 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 FAM72A-208ENST00000607379 1139 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 AL121809.2-201ENST00000613169 341 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 AC051619.3-201ENST00000560646 2426 ntBASIC6.27□□□□□ -1.41
SPTA1P02549 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SPTA1P02549 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.27□□□□□ -1.41
SPTA1P02549 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
SPTA1P02549 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms