Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL592227.1-201ENST00000614748 126 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 FAM184A-213ENST00000617072 1251 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AC011472.5-201ENST00000624079 508 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AL109920.1-201ENST00000632749 415 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AC022726.2-201ENST00000634673 547 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 SAMMSON-227ENST00000642114 1199 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AC125238.2-201ENST00000430003 1440 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 RBPJP2-201ENST00000618187 1444 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 LYARP1-201ENST00000436977 1501 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AL137141.1-201ENST00000624622 4836 ntBASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC3.33□□□□□ -1.88
LINC01558Q9Y6Z2 AP001642.1-201ENST00000624727 2117 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC004817.4-201ENST00000602396 3625 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP185-201ENST00000362813 326 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RNA5SP452-201ENST00000363004 119 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RN7SKP47-201ENST00000365347 328 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 UPF3AP1-201ENST00000413731 1126 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MRPS18BP1-201ENST00000414228 192 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RPL5P28-201ENST00000418634 693 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LINC00403-201ENST00000421423 545 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LINC00114-202ENST00000429621 827 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL731892.1-201ENST00000437364 1192 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 GAS5-219ENST00000449289 542 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 IGHJ1P-201ENST00000450690 55 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC006159.1-201ENST00000452009 386 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 NUTF2P5-201ENST00000475013 379 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RPS4XP17-201ENST00000479057 754 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RPL23AP68-201ENST00000480924 445 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RPL7AP26-201ENST00000488538 813 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC084398.1-201ENST00000494902 459 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PARP8-206ENST00000503665 572 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC114786.3-201ENST00000509304 705 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LINC02065-201ENST00000509924 562 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 IGLV3-24-201ENST00000517477 197 ntBASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 RPS20-207ENST00000520627 423 ntTSL 5 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 LINC01606-206ENST00000520929 411 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC3.32□□□□□ -1.88
LINC01558Q9Y6Z2 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms