Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 HNRNPCP2-201ENST00000399515 881 ntBASIC7.59□□□□□ -1.19
TPM4P67936 AL359715.1-201ENST00000404330 555 ntBASIC7.59□□□□□ -1.19
TPM4P67936 RPL23AP18-201ENST00000416139 468 ntBASIC7.59□□□□□ -1.19
TPM4P67936 VDAC1P10-201ENST00000416715 891 ntBASIC7.59□□□□□ -1.19
TPM4P67936 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.59□□□□□ -1.19
TPM4P67936 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TPM4P67936 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 AC009299.1-201ENST00000429684 717 ntBASIC7.59□□□□□ -1.19
TPM4P67936 ATP5G1P6-201ENST00000451206 412 ntBASIC7.59□□□□□ -1.19
TPM4P67936 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.59□□□□□ -1.19
TPM4P67936 AL591122.1-201ENST00000487348 492 ntBASIC7.59□□□□□ -1.19
TPM4P67936 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.59□□□□□ -1.19
TPM4P67936 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC7.59□□□□□ -1.19
TPM4P67936 AP000436.1-201ENST00000605239 800 ntBASIC7.59□□□□□ -1.19
TPM4P67936 AC097467.4-201ENST00000605504 141 ntBASIC7.59□□□□□ -1.19
TPM4P67936 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 AC087072.2-201ENST00000621060 682 ntBASIC7.59□□□□□ -1.19
TPM4P67936 MIR6834-201ENST00000622807 81 ntBASIC7.59□□□□□ -1.19
TPM4P67936 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.59□□□□□ -1.19
TPM4P67936 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 CDY19P-201ENST00000411668 1613 ntBASIC7.59□□□□□ -1.19
TPM4P67936 CDY18P-201ENST00000438294 1609 ntBASIC7.59□□□□□ -1.19
TPM4P67936 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 AC006213.6-201ENST00000623722 4179 ntBASIC7.59□□□□□ -1.2
TPM4P67936 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.59□□□□□ -1.2
TPM4P67936 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
TPM4P67936 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
TPM4P67936 CCAT2-201ENST00000630920 1752 ntBASIC7.59□□□□□ -1.2
TPM4P67936 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 AKAP17BP-201ENST00000431706 2719 ntBASIC7.58□□□□□ -1.2
TPM4P67936 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.58□□□□□ -1.2
TPM4P67936 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 RNA5SP188-201ENST00000362916 129 ntBASIC7.58□□□□□ -1.2
TPM4P67936 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.58□□□□□ -1.2
TPM4P67936 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.58□□□□□ -1.2
TPM4P67936 TAS2R2P-201ENST00000421146 910 ntBASIC7.58□□□□□ -1.2
TPM4P67936 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.58□□□□□ -1.2
TPM4P67936 HBBP1-201ENST00000433329 439 ntBASIC7.58□□□□□ -1.2
TPM4P67936 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC7.58□□□□□ -1.2
TPM4P67936 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.58□□□□□ -1.2
TPM4P67936 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
TPM4P67936 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 UBE2CP4-201ENST00000561405 535 ntBASIC7.58□□□□□ -1.2
TPM4P67936 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.58□□□□□ -1.2
TPM4P67936 AC005070.1-201ENST00000603744 365 ntBASIC7.58□□□□□ -1.2
TPM4P67936 AL354718.1-201ENST00000619764 589 ntBASIC7.58□□□□□ -1.2
TPM4P67936 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 AP000641.1-201ENST00000531988 1639 ntBASIC7.58□□□□□ -1.2
TPM4P67936 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 AC087392.3-202ENST00000358446 1754 ntBASIC7.58□□□□□ -1.2
TPM4P67936 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 AC020658.2-201ENST00000559030 4020 ntBASIC7.58□□□□□ -1.2
TPM4P67936 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
TPM4P67936 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
TPM4P67936 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
TPM4P67936 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.57□□□□□ -1.2
TPM4P67936 Z97989.1-201ENST00000531702 2421 ntBASIC7.57□□□□□ -1.2
TPM4P67936 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
TPM4P67936 STAG3L4-201ENST00000352103 530 ntBASIC7.57□□□□□ -1.2
TPM4P67936 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
TPM4P67936 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms