Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC3P40938 PRKAA1-201ENST00000296800 1134 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AC092634.1-201ENST00000366505 199 ntBASIC6.39□□□□□ -1.39
RFC3P40938 MIR640-201ENST00000385086 96 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC006511.2-201ENST00000388966 660 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC3P40938 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.39□□□□□ -1.39
RFC3P40938 AC007365.2-201ENST00000428806 458 ntBASIC6.39□□□□□ -1.39
RFC3P40938 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.39□□□□□ -1.39
RFC3P40938 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 YRDCP3-201ENST00000456507 480 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC115223.1-201ENST00000466377 870 ntBASIC6.39□□□□□ -1.39
RFC3P40938 RPS4XP17-201ENST00000479057 754 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC009567.2-201ENST00000502989 349 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC146944.2-201ENST00000504546 1073 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AC139495.1-201ENST00000510264 1073 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AC027801.3-201ENST00000515049 698 ntBASIC6.39□□□□□ -1.39
RFC3P40938 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC3P40938 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.39□□□□□ -1.39
RFC3P40938 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.39□□□□□ -1.39
RFC3P40938 MIR6849-201ENST00000618543 69 ntBASIC6.39□□□□□ -1.39
RFC3P40938 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
RFC3P40938 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.39□□□□□ -1.39
RFC3P40938 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.39□□□□□ -1.39
RFC3P40938 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.39□□□□□ -1.39
RFC3P40938 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
RFC3P40938 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
RFC3P40938 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.38□□□□□ -1.39
RFC3P40938 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 AC007938.1-201ENST00000562524 2902 ntBASIC6.38□□□□□ -1.39
RFC3P40938 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 VN1R66P-201ENST00000412929 916 ntBASIC6.38□□□□□ -1.39
RFC3P40938 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.38□□□□□ -1.39
RFC3P40938 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 OR51P1P-201ENST00000447547 942 ntBASIC6.38□□□□□ -1.39
RFC3P40938 NUCKS1P1-201ENST00000452067 703 ntBASIC6.38□□□□□ -1.39
RFC3P40938 AL096803.1-201ENST00000456921 1021 ntBASIC6.38□□□□□ -1.39
RFC3P40938 RN7SL160P-201ENST00000468558 284 ntBASIC6.38□□□□□ -1.39
RFC3P40938 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.38□□□□□ -1.39
RFC3P40938 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.38□□□□□ -1.39
RFC3P40938 RN7SKP11-201ENST00000517018 287 ntBASIC6.38□□□□□ -1.39
RFC3P40938 OR7E154P-201ENST00000525174 932 ntBASIC6.38□□□□□ -1.39
RFC3P40938 OR4A1P-201ENST00000532342 920 ntBASIC6.38□□□□□ -1.39
RFC3P40938 SAA3P-201ENST00000533267 365 ntBASIC6.38□□□□□ -1.39
RFC3P40938 AL132640.1-201ENST00000559594 619 ntBASIC6.38□□□□□ -1.39
RFC3P40938 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.38□□□□□ -1.39
RFC3P40938 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.38□□□□□ -1.39
RFC3P40938 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 AL049541.2-201ENST00000626377 555 ntBASIC6.38□□□□□ -1.39
RFC3P40938 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.38□□□□□ -1.39
RFC3P40938 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.38□□□□□ -1.39
RFC3P40938 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RFC3P40938 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RFC3P40938 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.38□□□□□ -1.39
RFC3P40938 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms