Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RN7SKP271-201ENST00000410528 320 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
COL15A1P39059 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 HMGN1P2-201ENST00000445197 310 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 HSD3BP3-201ENST00000514706 994 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 AL445383.1-201ENST00000554689 874 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 AC034229.6-201ENST00000623704 224 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC8.61□□□□□ -1.03
COL15A1P39059 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 CASC19-205ENST00000641013 1411 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC074141.1-201ENST00000588129 2995 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
COL15A1P39059 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.61□□□□□ -1.03
COL15A1P39059 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.61□□□□□ -1.03
COL15A1P39059 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.61□□□□□ -1.03
COL15A1P39059 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 ENO1P4-201ENST00000416471 1785 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
COL15A1P39059 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 RNA5SP77-201ENST00000365394 120 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 AL359694.1-201ENST00000403247 604 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 FABP5P1-201ENST00000423401 411 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
COL15A1P39059 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 RNA5SP441-201ENST00000516809 88 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC006512.2-201ENST00000543250 486 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 RPL41P2-201ENST00000544920 409 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC8.61□□□□□ -1.03
COL15A1P39059 AC026956.1-201ENST00000558741 396 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
COL15A1P39059 CTSLP2-201ENST00000580501 394 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC005726.4-201ENST00000582858 458 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
COL15A1P39059 SNORD91A-202ENST00000609620 191 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 RN7SL261P-201ENST00000613441 282 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 uc_338.31-201ENST00000615595 186 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 MIR6721-201ENST00000617181 87 ntBASIC8.61□□□□□ -1.03
COL15A1P39059 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC8.61□□□□□ -1.03
COL15A1P39059 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
COL15A1P39059 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.6□□□□□ -1.03
COL15A1P39059 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
COL15A1P39059 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.6□□□□□ -1.03
COL15A1P39059 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
COL15A1P39059 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.6□□□□□ -1.03
COL15A1P39059 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
COL15A1P39059 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
COL15A1P39059 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 SNORA70.3-201ENST00000365075 132 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 RBBP4P5-201ENST00000398583 1266 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 PSMA6P1-201ENST00000400275 741 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 MTND6P1-201ENST00000417434 424 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.6□□□□□ -1.03
COL15A1P39059 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.6□□□□□ -1.03
COL15A1P39059 PAICSP2-201ENST00000429118 1150 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 PSMD10P2-201ENST00000432890 672 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 AC245047.1-201ENST00000433276 873 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC8.6□□□□□ -1.03
COL15A1P39059 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.6□□□□□ -1.03
COL15A1P39059 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
COL15A1P39059 AC091874.2-201ENST00000505889 720 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 AL390198.2-201ENST00000510553 222 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC8.6□□□□□ -1.03
COL15A1P39059 SNORA74.1-201ENST00000516320 180 ntBASIC8.6□□□□□ -1.03
COL15A1P39059 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.6□□□□□ -1.03
COL15A1P39059 AC135983.3-201ENST00000528049 1226 ntBASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms