Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.56□□□□□ -1.36
CD40P25942 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.56□□□□□ -1.36
CD40P25942 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CD40P25942 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD40P25942 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 MTHFD2P5-201ENST00000320415 844 ntBASIC6.55□□□□□ -1.36
CD40P25942 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD40P25942 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 RPL12P10-201ENST00000413498 498 ntBASIC6.55□□□□□ -1.36
CD40P25942 XKRYP4-201ENST00000414395 483 ntBASIC6.55□□□□□ -1.36
CD40P25942 AC004986.1-201ENST00000414855 607 ntBASIC6.55□□□□□ -1.36
CD40P25942 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 PPIL1P1-201ENST00000423936 499 ntBASIC6.55□□□□□ -1.36
CD40P25942 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD40P25942 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 XKRYP5-201ENST00000449659 483 ntBASIC6.55□□□□□ -1.36
CD40P25942 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.55□□□□□ -1.36
CD40P25942 LINC01706-201ENST00000455299 748 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC008280.2-201ENST00000455473 307 ntBASIC6.55□□□□□ -1.36
CD40P25942 OR7E62P-201ENST00000456741 477 ntBASIC6.55□□□□□ -1.36
CD40P25942 RN7SL332P-201ENST00000482163 254 ntBASIC6.55□□□□□ -1.36
CD40P25942 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AC113420.1-201ENST00000507903 571 ntBASIC6.55□□□□□ -1.36
CD40P25942 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC139713.1-202ENST00000512366 460 ntBASIC6.55□□□□□ -1.36
CD40P25942 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC6.55□□□□□ -1.36
CD40P25942 GTF2IP11-201ENST00000526931 420 ntBASIC6.55□□□□□ -1.36
CD40P25942 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.55□□□□□ -1.36
CD40P25942 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 MIR4437-201ENST00000581331 60 ntBASIC6.55□□□□□ -1.36
CD40P25942 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.55□□□□□ -1.36
CD40P25942 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 AL022238.3-201ENST00000609279 443 ntBASIC6.55□□□□□ -1.36
CD40P25942 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC231759.1-201ENST00000616455 597 ntBASIC6.55□□□□□ -1.36
CD40P25942 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.55□□□□□ -1.36
CD40P25942 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 AL035461.2-201ENST00000619201 524 ntBASIC6.55□□□□□ -1.36
CD40P25942 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.55□□□□□ -1.36
CD40P25942 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 AC016930.1-201ENST00000468766 2205 ntBASIC6.55□□□□□ -1.36
CD40P25942 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD40P25942 AC145207.5-201ENST00000582866 2682 ntBASIC6.55□□□□□ -1.36
CD40P25942 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 APP-209ENST00000440126 2846 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 CASP14-201ENST00000427043 3241 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CD40P25942 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 HSPD1P7-201ENST00000447985 1686 ntBASIC6.55□□□□□ -1.36
CD40P25942 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CD40P25942 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms