Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC120036.3-201ENST00000517826 292 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC6.86□□□□□ -1.31
CDH3P22223 OR7E19P-202ENST00000589942 844 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC137695.2-201ENST00000603123 754 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AL137246.1-201ENST00000607072 977 ntBASIC6.86□□□□□ -1.31
CDH3P22223 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 AL161420.1-201ENST00000619393 264 ntBASIC6.86□□□□□ -1.31
CDH3P22223 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 AC006453.3-201ENST00000635891 377 ntBASIC6.86□□□□□ -1.31
CDH3P22223 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.86□□□□□ -1.31
CDH3P22223 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CDH3P22223 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CDH3P22223 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH3P22223 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH3P22223 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 FUNDC2P3-201ENST00000334716 533 ntBASIC6.85□□□□□ -1.31
CDH3P22223 FAM204BP-201ENST00000369171 701 ntBASIC6.85□□□□□ -1.31
CDH3P22223 RNU1-56P-201ENST00000391303 164 ntBASIC6.85□□□□□ -1.31
CDH3P22223 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CDH3P22223 PDCL3P5-201ENST00000398028 722 ntBASIC6.85□□□□□ -1.31
CDH3P22223 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 RN7SKP268-201ENST00000411107 316 ntBASIC6.85□□□□□ -1.31
CDH3P22223 RNA5SP280-201ENST00000411230 115 ntBASIC6.85□□□□□ -1.31
CDH3P22223 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CDH3P22223 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 AL133480.2-201ENST00000456723 487 ntBASIC6.85□□□□□ -1.31
CDH3P22223 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 AC126615.1-201ENST00000470084 630 ntBASIC6.85□□□□□ -1.31
CDH3P22223 RN7SL797P-201ENST00000486314 297 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AL079303.1-201ENST00000486611 463 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH3P22223 AC100854.1-201ENST00000520351 341 ntBASIC6.85□□□□□ -1.31
CDH3P22223 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.85□□□□□ -1.31
CDH3P22223 RBMS2P1-201ENST00000525031 1226 ntBASIC6.85□□□□□ -1.31
CDH3P22223 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 MIR378H-201ENST00000579966 83 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC6.85□□□□□ -1.31
CDH3P22223 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 AC104184.1-201ENST00000607513 721 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 AC007671.1-201ENST00000616957 830 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 AC087894.3-201ENST00000623682 349 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AC005355.2-201ENST00000625064 484 ntBASIC6.85□□□□□ -1.31
CDH3P22223 AL049541.2-201ENST00000626377 555 ntBASIC6.85□□□□□ -1.31
CDH3P22223 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.85□□□□□ -1.31
CDH3P22223 AL139254.2-202ENST00000641937 1156 ntBASIC6.85□□□□□ -1.31
CDH3P22223 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 AC011008.2-201ENST00000624866 3352 ntBASIC6.85□□□□□ -1.31
CDH3P22223 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 AC127070.3-201ENST00000503695 3263 ntBASIC6.85□□□□□ -1.31
CDH3P22223 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
CDH3P22223 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CDH3P22223 AC006600.2-201ENST00000624834 2506 ntBASIC6.85□□□□□ -1.31
CDH3P22223 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
CDH3P22223 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms