Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
ERCC3P19447 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
ERCC3P19447 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
ERCC3P19447 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.68□□□□□ -1.02
ERCC3P19447 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
ERCC3P19447 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 RBMX2P2-201ENST00000257020 946 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
ERCC3P19447 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.67□□□□□ -1.02
ERCC3P19447 RPL10P10-201ENST00000403509 664 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL355615.1-201ENST00000406187 641 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 RNA5SP177-201ENST00000410122 107 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 RN7SKP225-201ENST00000410405 352 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 SSR1P2-201ENST00000415208 787 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL158050.1-201ENST00000416077 457 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 HYALP1-201ENST00000417674 1279 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 FTOP1-201ENST00000419363 861 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 CYP4F34P-201ENST00000425951 481 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL022163.1-201ENST00000430261 1569 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 PHB2P1-201ENST00000434943 890 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 RPL14P5-201ENST00000436474 730 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.67□□□□□ -1.02
ERCC3P19447 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 CCRL1P1-201ENST00000449542 1053 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 EIF3LP2-201ENST00000457262 807 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC018892.2-201ENST00000457656 693 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 AC008040.4-201ENST00000494834 768 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.67□□□□□ -1.02
ERCC3P19447 OR5H3P-201ENST00000502817 919 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
ERCC3P19447 AL158068.1-201ENST00000506116 616 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC8.67□□□□□ -1.02
ERCC3P19447 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 UGT2B24P-201ENST00000514441 1597 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC8.67□□□□□ -1.02
ERCC3P19447 OR4A41P-201ENST00000533053 928 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC8.67□□□□□ -1.02
ERCC3P19447 AL512310.9-201ENST00000553311 948 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 CYP4A44P-201ENST00000569984 154 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC027796.1-201ENST00000575593 512 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC016629.2-201ENST00000597341 199 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC024085.1-201ENST00000604299 432 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AC012640.3-201ENST00000607847 430 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 AL512427.1-201ENST00000618593 349 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
ERCC3P19447 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 AC126773.4-201ENST00000612545 3043 ntBASIC8.67□□□□□ -1.02
ERCC3P19447 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
ERCC3P19447 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
ERCC3P19447 ABCA11P-202ENST00000504019 2110 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.66□□□□□ -1.02
ERCC3P19447 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 OR8B9P-202ENST00000642028 5216 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 AL157831.2-201ENST00000564681 3095 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.66□□□□□ -1.02
ERCC3P19447 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
ERCC3P19447 RNFT1P3-201ENST00000340898 1052 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC8.66□□□□□ -1.02
ERCC3P19447 SSX6-201ENST00000376932 562 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC8.66□□□□□ -1.02
ERCC3P19447 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
ERCC3P19447 MRPL32P1-201ENST00000406301 247 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC096533.1-201ENST00000411645 353 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 VN1R51P-201ENST00000411675 945 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL355862.1-201ENST00000412705 353 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC8.66□□□□□ -1.02
ERCC3P19447 MICG-208ENST00000416822 132 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC092042.2-201ENST00000417304 331 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.66□□□□□ -1.02
ERCC3P19447 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC8.66□□□□□ -1.02
ERCC3P19447 AC006994.1-201ENST00000438212 839 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL451074.4-201ENST00000447545 470 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AL031736.1-201ENST00000449688 618 ntBASIC8.66□□□□□ -1.02
ERCC3P19447 AC104389.2-201ENST00000450768 887 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms