Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SGSM1-201ENST00000400358 6643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CHD7Q9P2D1 GRAMD1B-206ENST00000529432 6266 ntTSL 2 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC013399.1-201ENST00000450311 418 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AL136228.1-201ENST00000622221 319 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC015871.3-201ENST00000618835 2261 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC119674.1-202ENST00000641333 1860 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 RNU4-34P-201ENST00000410431 124 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SNORA70D-201ENST00000578836 135 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC024940.4-201ENST00000605507 246 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AL591167.1-201ENST00000607321 456 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC007993.1-201ENST00000621298 2430 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 EIF3EP1-201ENST00000433978 1316 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 UNC45B-201ENST00000268876 5679 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TRAK2-201ENST00000332624 6510 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CACNA1C-201ENST00000327702 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 CACNA1E-203ENST00000360108 6970 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AP000350.6-201ENST00000609510 5637 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 RN7SKP216-201ENST00000411050 312 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AL355433.1-201ENST00000422804 300 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 RPS7P14-201ENST00000426405 583 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 H2AFZP6-201ENST00000444403 394 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC011225.1-201ENST00000457751 369 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 AC090236.2-201ENST00000587933 1101 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 MIR6748-201ENST00000610433 71 ntBASIC6.81□□□□□ -1.32
CHD7Q9P2D1 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 YME1L1-203ENST00000376016 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
CHD7Q9P2D1 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL391422.1-201ENST00000402155 436 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 CYCSP17-201ENST00000407870 315 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AC239367.3-201ENST00000428996 814 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL445665.1-202ENST00000452436 324 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 RNA5SP34-201ENST00000516887 130 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AL023806.3-201ENST00000638502 2704 ntBASIC6.8□□□□□ -1.32
CHD7Q9P2D1 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHD7Q9P2D1 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms