Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CHD8Q9HCK8 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AL139805.1-201ENST00000407837 289 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 RPL23AP28-201ENST00000448062 470 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 RPS29P22-201ENST00000472363 168 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 NDUFA5P12-201ENST00000503796 343 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AL390198.2-201ENST00000510553 222 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 Y_RNA.667-201ENST00000516212 107 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 RNA5SP34-201ENST00000516887 130 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 BNIP3P11-201ENST00000603878 563 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ARHGAP42P5-201ENST00000548856 2936 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC090132.1-201ENST00000524071 1480 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 VN2R1P-201ENST00000449668 1743 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 CDK15-202ENST00000410091 1780 ntAPPRIS P3 TSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC103591.2-201ENST00000265259 766 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AL807761.1-201ENST00000417622 171 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC009220.1-201ENST00000451614 275 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 RN7SL705P-201ENST00000481678 294 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC093890.1-201ENST00000502554 540 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 RN7SKP238-201ENST00000516483 249 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 AC007346.1-201ENST00000569208 867 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ACTG1P15-201ENST00000570019 1063 ntBASIC6.34□□□□□ -1.39
CHD8Q9HCK8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CHD8Q9HCK8 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
CHD8Q9HCK8 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CHD8Q9HCK8 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC6.34□□□□□ -1.4
CHD8Q9HCK8 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.34□□□□□ -1.4
CHD8Q9HCK8 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CHD8Q9HCK8 TRIM53BP-201ENST00000532912 1720 ntBASIC6.34□□□□□ -1.4
CHD8Q9HCK8 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RNA5SP321-201ENST00000362722 111 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AL354868.1-201ENST00000417077 482 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 STRADBP1-201ENST00000478954 1281 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 RN7SL797P-201ENST00000486314 297 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SNX29P2-204ENST00000603801 875 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SAMMSON-227ENST00000642114 1199 ntBASIC6.33□□□□□ -1.4
CHD8Q9HCK8 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CHD8Q9HCK8 AL121936.1-201ENST00000641660 2884 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms