Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MIR16-2-201ENST00000362117 81 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RNU6-797P-201ENST00000363101 109 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RNU6-670P-201ENST00000364312 104 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RNA5SP23-201ENST00000391006 105 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RNU4-22P-201ENST00000411058 166 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 SETP15-201ENST00000412724 337 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 OR8G2P-201ENST00000412796 908 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 CTSLP8-201ENST00000413075 967 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 GNAI2P2-201ENST00000417003 916 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ZNF863P-201ENST00000426746 417 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 FABP5P3-201ENST00000437960 408 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 CASK-AS1-201ENST00000451126 515 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RN7SL201P-201ENST00000482306 296 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 LINC00920-201ENST00000499966 2147 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC034244.1-201ENST00000507687 207 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC093281.2-201ENST00000510153 597 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 OR8G3P-201ENST00000533406 921 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 VN1R92P-201ENST00000598511 928 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AP002906.1-201ENST00000603405 233 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC099785.1-201ENST00000605697 437 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AL356052.1-201ENST00000605764 376 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 RNU4-89P-201ENST00000607443 133 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC084036.1-201ENST00000609190 508 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC008083.4-201ENST00000615076 444 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 FRG1HP-204ENST00000617940 757 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC124312.6-202ENST00000623624 418 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 AC010480.1-201ENST00000624823 684 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MIR193BHG-210ENST00000641327 515 ntBASIC7.11□□□□□ -1.27
ATG4DQ86TL0 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ATG4DQ86TL0 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC016831.3-201ENST00000446451 1723 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC009501.3-201ENST00000605001 1352 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 SLC9B1P3-201ENST00000452667 1334 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 ANKRD36P1-201ENST00000344424 659 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RN7SKP28-201ENST00000364770 305 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RPL12P27-201ENST00000414870 496 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 MTND6P1-201ENST00000417434 424 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 AF127577.3-201ENST00000430391 781 ntTSL 2 BASIC7.1□□□□□ -1.27
ATG4DQ86TL0 USP9YP22-201ENST00000438971 294 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 EFCAB14P1-201ENST00000442409 463 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 MED28P8-201ENST00000454831 521 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RNU7-125P-201ENST00000458760 62 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 CABYRP1-201ENST00000465493 1045 ntBASIC7.1□□□□□ -1.27
ATG4DQ86TL0 RN7SL388P-201ENST00000498736 339 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms