Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC073488.8-201ENST00000631952 757 ntBASIC6.22□□□□□ -1.41
C11orf88Q6PI97 AP000842.4-201ENST00000638781 748 ntBASIC6.22□□□□□ -1.41
C11orf88Q6PI97 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C11orf88Q6PI97 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
C11orf88Q6PI97 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 RNA5SP378-201ENST00000363646 120 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PPCS-204ENST00000372562 966 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MIR199B-201ENST00000384849 110 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 VN1R31P-201ENST00000417498 730 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 DPPA2P2-201ENST00000418220 897 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC003071.2-201ENST00000423857 315 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC091390.2-201ENST00000432573 374 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC231532.1-201ENST00000438584 312 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC019185.3-201ENST00000438805 323 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC108039.2-201ENST00000440214 359 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC026336.1-201ENST00000466577 351 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 RN7SL228P-201ENST00000470060 303 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 ALG13-214ENST00000482742 620 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC066616.1-201ENST00000486795 413 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 NPY6R-201ENST00000503807 1112 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 NDFIP1P1-201ENST00000543144 525 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 EIF4EBP2P2-201ENST00000563883 333 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC243312.1-201ENST00000570582 275 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC007262.1-201ENST00000604099 321 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 MARK3P1-201ENST00000604796 643 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC097381.3-201ENST00000608962 462 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PART1_3.1-201ENST00000619680 131 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 CDYLP1-201ENST00000419017 1458 ntBASIC6.21□□□□□ -1.42
C11orf88Q6PI97 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.21□□□□□ -1.42
C11orf88Q6PI97 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL596244.1-201ENST00000567068 3779 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 RNA5SP514-201ENST00000363717 111 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.2□□□□□ -1.42
C11orf88Q6PI97 AL109918.1-202ENST00000406724 436 ntBASIC6.2□□□□□ -1.42
C11orf88Q6PI97 VN1R33P-201ENST00000411800 887 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms