Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 JAML-213ENST00000640745 951 ntTSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 MFSD8-218ENST00000641186 4448 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AC020978.6-201ENST00000571197 3177 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AL121949.2-201ENST00000403446 1548 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC9.35□□□□□ -0.91
CCDC27Q2M243 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
CCDC27Q2M243 AL359263.1-201ENST00000441188 2796 ntBASIC9.35□□□□□ -0.91
CCDC27Q2M243 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 CASC19-238ENST00000641523 1558 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 MIR421-201ENST00000365696 85 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC098592.2-201ENST00000413158 265 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC097713.1-201ENST00000418025 562 ntTSL 4 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 VN1R37P-201ENST00000419096 748 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 MYO5BP3-201ENST00000431872 1279 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AL450384.2-202ENST00000436485 656 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 PRDX1P1-201ENST00000449329 596 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AGKP1-201ENST00000455254 1263 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 RPS10P20-201ENST00000494130 463 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC010409.2-201ENST00000505780 478 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC118282.1-201ENST00000506408 765 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AP001803.1-201ENST00000525668 147 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC024614.1-201ENST00000577546 307 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC133794.1-201ENST00000602731 914 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC091046.2-201ENST00000620775 665 ntBASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
CCDC27Q2M243 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC9.34□□□□□ -0.91
CCDC27Q2M243 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
CCDC27Q2M243 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 AC009948.3-201ENST00000603415 1798 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 ZBTB8OSP2-201ENST00000423890 504 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 AC134879.1-201ENST00000426062 394 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC9.33□□□□□ -0.92
CCDC27Q2M243 BX005266.3-201ENST00000443013 1075 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 AL353803.3-201ENST00000444641 335 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
CCDC27Q2M243 OR52I1-201ENST00000450052 1050 ntBASIC9.33□□□□□ -0.92
CCDC27Q2M243 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 320.6 ms