Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.61□□□□□ -1.19
TPM4P67936 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 AC007012.2-201ENST00000623206 1676 ntBASIC7.61□□□□□ -1.19
TPM4P67936 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 AP003486.1-201ENST00000525716 3994 ntBASIC7.61□□□□□ -1.19
TPM4P67936 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 U3.1-201ENST00000362500 215 ntBASIC7.61□□□□□ -1.19
TPM4P67936 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TPM4P67936 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.61□□□□□ -1.19
TPM4P67936 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC7.61□□□□□ -1.19
TPM4P67936 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.61□□□□□ -1.19
TPM4P67936 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.61□□□□□ -1.19
TPM4P67936 AC245452.2-201ENST00000435222 392 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.61□□□□□ -1.19
TPM4P67936 AL139156.3-201ENST00000454802 394 ntBASIC7.61□□□□□ -1.19
TPM4P67936 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.61□□□□□ -1.19
TPM4P67936 WBP1LP1-201ENST00000460451 896 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 IGLVV-66-201ENST00000523818 341 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 OR7A11P-201ENST00000597719 953 ntBASIC7.61□□□□□ -1.19
TPM4P67936 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TPM4P67936 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 AP005212.3-201ENST00000619964 528 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AP001885.1-201ENST00000621658 558 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AC016542.3-201ENST00000623520 619 ntBASIC7.61□□□□□ -1.19
TPM4P67936 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TPM4P67936 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 OLMALINC-203ENST00000641087 3779 ntBASIC7.61□□□□□ -1.19
TPM4P67936 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.61□□□□□ -1.19
TPM4P67936 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 AC130456.1-201ENST00000565085 1363 ntBASIC7.6□□□□□ -1.19
TPM4P67936 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 AL731556.1-201ENST00000394628 3711 ntBASIC7.6□□□□□ -1.19
TPM4P67936 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC7.6□□□□□ -1.19
TPM4P67936 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.6□□□□□ -1.19
TPM4P67936 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 SNORA51.7-201ENST00000384171 134 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.6□□□□□ -1.19
TPM4P67936 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 LINC01320-202ENST00000453774 1205 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 AP000805.1-201ENST00000471604 784 ntBASIC7.6□□□□□ -1.19
TPM4P67936 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 AC106774.2-201ENST00000510266 406 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AC018541.1-201ENST00000517706 764 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 IGLV3-6-201ENST00000523937 250 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AC007537.1-201ENST00000539347 327 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 AC233290.1-201ENST00000553021 1186 ntBASIC7.6□□□□□ -1.19
TPM4P67936 OR4F28P-201ENST00000559128 938 ntBASIC7.6□□□□□ -1.19
TPM4P67936 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 AC026458.1-201ENST00000564330 438 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 AC004232.1-201ENST00000571388 208 ntBASIC7.6□□□□□ -1.19
TPM4P67936 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 OR4F8P-201ENST00000589943 937 ntBASIC7.6□□□□□ -1.19
TPM4P67936 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.6□□□□□ -1.19
TPM4P67936 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.6□□□□□ -1.19
TPM4P67936 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TPM4P67936 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
TPM4P67936 AL359263.1-201ENST00000441188 2796 ntBASIC7.59□□□□□ -1.19
TPM4P67936 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.59□□□□□ -1.19
TPM4P67936 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TPM4P67936 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 AC007159.1-201ENST00000566529 4706 ntBASIC7.59□□□□□ -1.19
TPM4P67936 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.59□□□□□ -1.19
TPM4P67936 HMGB1P39-201ENST00000366304 880 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms