Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CDY19P-201ENST00000411668 1613 ntBASIC6.61□□□□□ -1.35
SKP1P63208 CDY18P-201ENST00000438294 1609 ntBASIC6.61□□□□□ -1.35
SKP1P63208 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC6.61□□□□□ -1.35
SKP1P63208 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.61□□□□□ -1.35
SKP1P63208 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SKP1P63208 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SKP1P63208 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
SKP1P63208 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.61□□□□□ -1.35
SKP1P63208 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.61□□□□□ -1.35
SKP1P63208 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 AL589993.1-201ENST00000407450 2524 ntBASIC6.6□□□□□ -1.35
SKP1P63208 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 AC122713.2-201ENST00000624942 3335 ntBASIC6.6□□□□□ -1.35
SKP1P63208 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 OR2A3P-202ENST00000641249 1776 ntBASIC6.6□□□□□ -1.35
SKP1P63208 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 RN7SKP257-201ENST00000364525 309 ntBASIC6.6□□□□□ -1.35
SKP1P63208 RNA5SP355-201ENST00000365317 135 ntBASIC6.6□□□□□ -1.35
SKP1P63208 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 MRPL32P1-201ENST00000406301 247 ntBASIC6.6□□□□□ -1.35
SKP1P63208 AC017035.1-201ENST00000411999 1115 ntBASIC6.6□□□□□ -1.35
SKP1P63208 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 AC092646.1-201ENST00000427142 901 ntBASIC6.6□□□□□ -1.35
SKP1P63208 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SKP1P63208 LSM3P3-201ENST00000436601 306 ntBASIC6.6□□□□□ -1.35
SKP1P63208 CHCHD4P5-201ENST00000436684 427 ntBASIC6.6□□□□□ -1.35
SKP1P63208 RPS10P14-201ENST00000440748 502 ntBASIC6.6□□□□□ -1.35
SKP1P63208 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 ST13P21-201ENST00000453250 1098 ntBASIC6.6□□□□□ -1.35
SKP1P63208 SETP4-201ENST00000455717 868 ntBASIC6.6□□□□□ -1.35
SKP1P63208 AL096803.1-201ENST00000456921 1021 ntBASIC6.6□□□□□ -1.35
SKP1P63208 CBX5P1-201ENST00000468470 561 ntBASIC6.6□□□□□ -1.35
SKP1P63208 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 PGBD4P1-201ENST00000473644 407 ntBASIC6.6□□□□□ -1.35
SKP1P63208 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 AC253576.1-201ENST00000511645 1156 ntBASIC6.6□□□□□ -1.35
SKP1P63208 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SKP1P63208 RN7SKP11-201ENST00000517018 287 ntBASIC6.6□□□□□ -1.35
SKP1P63208 RNA5SP278-201ENST00000517055 102 ntBASIC6.6□□□□□ -1.35
SKP1P63208 CARSP2-201ENST00000520688 277 ntBASIC6.6□□□□□ -1.35
SKP1P63208 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.6□□□□□ -1.35
SKP1P63208 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.6□□□□□ -1.35
SKP1P63208 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 RPS27AP19-201ENST00000597285 458 ntBASIC6.6□□□□□ -1.35
SKP1P63208 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 AC017037.4-201ENST00000624526 826 ntBASIC6.6□□□□□ -1.35
SKP1P63208 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.6□□□□□ -1.35
SKP1P63208 TMEM14EP-202ENST00000639378 1296 ntBASIC6.6□□□□□ -1.35
SKP1P63208 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.6□□□□□ -1.35
SKP1P63208 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SKP1P63208 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SKP1P63208 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.59□□□□□ -1.35
SKP1P63208 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SKP1P63208 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.59□□□□□ -1.35
SKP1P63208 AC011379.1-201ENST00000508713 3025 ntBASIC6.59□□□□□ -1.35
SKP1P63208 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.59□□□□□ -1.35
SKP1P63208 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.59□□□□□ -1.35
SKP1P63208 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
SKP1P63208 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SKP1P63208 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SKP1P63208 MIR99A-201ENST00000384906 81 ntBASIC6.59□□□□□ -1.35
SKP1P63208 RN7SKP148-201ENST00000410179 275 ntBASIC6.59□□□□□ -1.35
SKP1P63208 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.59□□□□□ -1.35
SKP1P63208 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.59□□□□□ -1.35
SKP1P63208 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.59□□□□□ -1.35
SKP1P63208 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.59□□□□□ -1.35
SKP1P63208 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.59□□□□□ -1.35
SKP1P63208 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SKP1P63208 OR7E7P-201ENST00000455678 1012 ntBASIC6.59□□□□□ -1.35
SKP1P63208 TREML3P-201ENST00000457327 501 ntBASIC6.59□□□□□ -1.35
SKP1P63208 OR13C1P-201ENST00000457612 963 ntBASIC6.59□□□□□ -1.35
SKP1P63208 AC079193.1-201ENST00000460497 588 ntBASIC6.59□□□□□ -1.35
SKP1P63208 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SKP1P63208 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.59□□□□□ -1.35
SKP1P63208 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.59□□□□□ -1.35
SKP1P63208 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.59□□□□□ -1.35
SKP1P63208 AP005902.2-201ENST00000518393 307 ntBASIC6.59□□□□□ -1.35
SKP1P63208 OR9L1P-201ENST00000529493 933 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms